Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq48153 141 9e-29 seq14636 111 2e-19 seq60581 87.8 2e-12 >seq48153 Length=1917 Score = 141 bits (156), Expect = 9e-29 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||||| |||||| |||||||| |||||||| ||| | || | | | || || |||| Sbjct 1438 ATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAGAGGGTACGGCCA-TCTTCCAGCT 1496 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| |||||| || ||||| |||||||||||||| ||||| Sbjct 1497 GCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGGATCT 1556 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||||| ||||| |||||||||| || | ||||| ||| ||||| | Sbjct 1557 TGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCG 1616 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || || || |||||||| Sbjct 1617 TCAGGGTCTTGACAAAGATCTGCAT 1641 Score = 141 bits (156), Expect = 9e-29 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||||| |||||| |||||||| |||||||| ||| | || | | | || || |||| Sbjct 1666 ATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAGAGGGTACGGCCA-TCTTCCAGCT 1724 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| |||||| || ||||| |||||||||||||| ||||| Sbjct 1725 GCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGGATCT 1784 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||||| ||||| |||||||||| || | ||||| ||| ||||| | Sbjct 1785 TGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCG 1844 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || || || |||||||| Sbjct 1845 TCAGGGTCTTGACAAAGATCTGCAT 1869 >seq14636 Length=6855 Score = 111 bits (122), Expect = 2e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923 ||||||| |||||||| | |||| ||||||||||||||| ||||| ||||| |||| Sbjct 1150 TGTACTCCACGATCTCCGTACACAAATTGCTGCATTTGATGGTGCCCAGGTTCTGCTGAT 1209 Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCG 148983 ||||||| | |||||| | ||| ||||||||||||||||| ||| || ||| ||| | Sbjct 1210 TGCTCTTCCGGTTGCAGGAGTCTTTGTACAGCATGTACGGCGTGCCGGTCTCCGTCTGGG 1269 Query 148984 TTTC 148987 ||| Sbjct 1270 ATTC 1273 >seq60581 Length=975 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 148499 GCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGC 148558 ||||||||||| |||||| || ||| || || || |||||||| || || | ||| Sbjct 107 GCCCTCGTACGTTTCGTACGGCCCTTGCTCCTTGGCAAGCTCGCAGCTGGCTTCCAACGC 166 Query 148559 GCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTA 148618 |||||| ||||| |||||| ||| ||| |||||| ||| |||| ||| ||| | Sbjct 167 GCCGTAATAAATGGTCTCGAAAATCTGCTGGTTGAGGAGCTGCGCCTCGGGGCTCTCGAA 226 Query 148619 CGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCG 148678 || | || | | | || ||||| || || ||||| || || | ||| ||||| || Sbjct 227 GGGGTACCTCATCAGGATGAAGGCGTCTGCCAGCCCCTGCACCCCGATGCCGATGGGACG 286 Query 148679 GTGTTTAATGTTGGAG 148694 ||| |||||||| Sbjct 287 GTGGCGTCTGTTGGAG 302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483041924990760