Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq7863 203 5e-46 seq547 203 5e-46 seq11652 197 2e-44 seq7810 194 2e-43 seq47476 172 8e-37 seq10554 149 9e-30 seq39795 138 2e-26 seq28635 95.1 2e-13 seq14636 93.3 6e-13 >seq7863 Length=7385 Score = 203 bits (224), Expect = 5e-46 Identities = 183/229 (80%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| |||| |||| || |||| ||||| Sbjct 5766 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 5819 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | ||||||| |||| Sbjct 5820 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 5879 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 5880 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 5939 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 5940 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 5988 >seq547 Length=1796 Score = 203 bits (224), Expect = 5e-46 Identities = 183/229 (80%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| |||| |||| || |||| ||||| Sbjct 1329 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 1276 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | ||||||| |||| Sbjct 1275 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 1216 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 1215 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 1156 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 1155 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 1107 >seq11652 Length=5695 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| |||| |||| || | || ||||| Sbjct 4764 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCCAGGCCATG 4817 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | ||||||| |||| Sbjct 4818 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 4877 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 4878 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 4937 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 4938 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 4986 >seq7810 Length=8894 Score = 194 bits (214), Expect = 2e-43 Identities = 181/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| |||| |||| || |||| ||||| Sbjct 8416 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 8363 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | ||||||| |||| Sbjct 8362 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 8303 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 8302 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 8243 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||| ||||| |||||| Sbjct 8242 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGCCCGAGTGCACCA 8194 >seq47476 Length=776 Score = 172 bits (190), Expect = 8e-37 Identities = 168/215 (78%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| |||| |||| || |||| ||||| Sbjct 473 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCCATG 526 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | ||||||| |||| Sbjct 527 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 586 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 587 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 646 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGT 725128 || | ||| | ||| ||||||| ||||||||| Sbjct 647 CTCCTGCTGCCCCGCGGGCTGGCCACGCACGCCGT 681 >seq10554 Length=42021 Score = 149 bits (164), Expect = 9e-30 Identities = 171/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||||||||| |||||||| |||||| |||| |||| ||| |||| ||| Sbjct 31162 TCTACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCA 31109 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| || ||||||||||| | || ||||| | || ||| | Sbjct 31108 TGGGCATCATGAACTCCTTCGTCAACGACATCTTTGAGCGCATTGCTGGAGAAGCCTCCC 31049 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||||| | | |||||||||| ||| ||| | | || ||||| ||||| ||||||| Sbjct 31048 GCCTGGCCCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATTCAGACGGCCGTGC 30989 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||||| | | | || || ||||||| |||||||||||| |||||||| Sbjct 30988 GCCTGCTGCTCCCGGGAGAGCTGGCCAAGCACGCCGTCTCGGAGGGCAC 30940 >seq39795 Length=2263 Score = 138 bits (152), Expect = 2e-26 Identities = 141/183 (77%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| | || |||| ||| ||||| ||||| Sbjct 352 TACAAGGTGCTGAAGCAGGTGCACCCCGACAACGG-----CATC-TCCTACAAGGCCATG 405 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||||| ||| Sbjct 406 GGCATCATGAACTCTTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCGTCGCGC 465 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 466 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 525 Query 725094 CTG 725096 ||| Sbjct 526 CTG 528 >seq28635 Length=94282 Score = 95.1 bits (104), Expect = 2e-13 Identities = 90/114 (79%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 || ||||||||||| || ||||| |||||| ||| | |||||||||| ||||| Sbjct 94197 GAACCGCTGCTGCGGGACAACCCCCGCCGCTTCGTCATCTTCCCCATCCAGTACCACGAC 94138 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829 || ||| | ||||| ||| ||||||||||| ||||| ||||| || |||||||| Sbjct 94137 ATCTGGCAGATGTA-CAAGAAGGCCGAGGCTTCCTTCTGGACGGCAGAGGAGGT 94085 >seq14636 Length=6855 Score = 93.3 bits (102), Expect = 6e-13 Identities = 105/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 262091 CAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTAC 262150 ||| |||||| ||||| | | |||| | |||||||||||||| |||||| | ||| Sbjct 1294 CAGCTCTGGTATGCCATCATTGAATCCCAGACGGAGACCGGCACGCCGTACATGCTGTAC 1235 Query 262151 AAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGC--CA 262208 || ||| || ||||| || ||||| ||||||||||||||||||| || | || || Sbjct 1234 AAAGACTCCTGCAACCGGAAGAGCAATCAGCAGAACCTGGGCACCA--TCAAATGCAGCA 1177 Query 262209 ACCTGTGCACCGAGATCGT 262227 | |||| || |||||||| Sbjct 1176 ATTTGTGTACGGAGATCGT 1158 Score = 87.8 bits (96), Expect = 3e-11 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 || || ||| || |||||||| || |||||||||||||| ||||||||||||||| Sbjct 5216 TGTTTCCTGCTGTGCATGAAGGATGACAGCATCGAGGGCATCTACGACACGCTCAAGCAG 5157 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 ||||| || ||||||||| | || || || ||||| | |||| Sbjct 5156 TGCGCCCTGATCTCCAAGTCTGCTGGTGGGATCGGCCTGGCCG 5114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7171763766209238