Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13]
62,699 sequences; 1,088,019,637 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq14636 100 3e-16
>seq14636
Length=6855
Score = 100 bits (110), Expect = 3e-16
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312
||||||||||| || ||||||||||||||||| |||||||||||||| |||||||||
Sbjct 5219 AGCTGTTTCCTGCTGTGCATGAAGGATGACAGCATCGAGGGCATCTACGACACGCTCAAG 5160
Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGG 19350
||||||| | |||||||||| | || || |||||
Sbjct 5159 CAGTGCGCCCTGATCTCCAAGTCTGCTGGTGGGATCGG 5122
Score = 87.8 bits (96), Expect = 2e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 79098 CTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCT 79157
||| | ||| || || |||||||| | ||||||||||| | ||||| ||| |||||
Sbjct 1154 CTCCACGATCTCCGTACACAAATTGCTGCATTTGATGGTGCCCAGGTTCTGCTGATTGCT 1213
Query 79158 CTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTC 79205
|||| ||| |||| ||| ||||| |||||||||||| ||||||||
Sbjct 1214 CTTCCGGTTGCAGGAGTCTTTGTACAGCATGTACGGCGTGCCGGTCTC 1261
Score = 82.4 bits (90), Expect = 8e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713
||||| || || | |||||||||| | ||||||| ||||||||| ||||||||||||
Sbjct 5122 CCGATCCCACCAGCAGACTTGGAGATCAGGGCGCACTGCTTGAGCGTGTCGTAGATGCCC 5181
Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCT 79751
||||| ||| |||||||| | |||||| |||||
Sbjct 5182 TCGATGCTGTCATCCTTCATGCACAGCAGGAAACAGCT 5219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548094900544560
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |