Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq6224 185 1e-41 seq48775 131 2e-25 >seq6224 Length=1053 Score = 185 bits (204), Expect = 1e-41 Identities = 579/885 (65%), Gaps = 24/885 (3%) Strand=Plus/Minus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || ||||||| ||| |||| ||| |||||||||||||| || || |||||| |||| Sbjct 883 CCGCTGAGCCAGGAGGAGGCATCGTTCCCCATCGCCTACTCCATGGTCATCCACAACAAA 824 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 ||||||||||| ||||| |||||| || || |||| ||||| |||||| |||||||| || Sbjct 823 ATCGAGATGTTTGAGCGGCTCCTGCGGTCCCTCTATGCCCCTCAGAACGTCTACTGCATC 764 Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGC 13850 ||||| ||| ||||||| | | ||| || ||| |||||| || ||| Sbjct 763 CACGTTGACAGCAAGTCCCCAGCCACCTTCCAGGAGGCCGTGCGGGCCATAGCAGCCTGC 704 Query 13851 TTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGC 13910 || || || || ||||| || ||| | ||||||| || | |||||| || Sbjct 703 TTTCCCAATGTCTTTGTGGCCAGTCGCCTGGAAAACGTGGTCTATGCTTCCTGGTCCCGG 644 Query 13911 GTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTAC 13970 ||||||||||||||| ||||||| ||||||| |||| | |||| ||| Sbjct 643 CTGCAGGCCGACCTCAACTGCATGCAGGACCTGCTGCAGAGCCCCATGCCGTGGCACTAC 584 Query 13971 CTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCG 14030 | |||||| || || | || ||||| |||||||||| ||||| || || ||| Sbjct 583 GTCCTCAACACTTGTGGCACCGATTTCCCCATCAAGACCAATGCCGAGATAGTCCGTGCG 524 Query 14031 CTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCATGCCCAACCACAAGC 14088 ||||||| ||| || |||| | ||||| || || | | | | || ||||| Sbjct 523 CTGAAGGTGCTGCAGGGACGGAACAGCATGGAGTCAGAGAAGCCCT--CGGCCCTCAAGC 466 Query 14089 TGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACC--GG 14146 | | || | || || || ||| || | | | | ||| | || | Sbjct 465 GGGAGCG---CTGGCAGTACCA--------CCA-CGAAGTGGGGAAGTTCATCTCCCGGA 418 Query 14147 CAGGAACA-AGGCCCCGCCGCC-GCTCAGGA-TC-CCCATCTTTGCGGGAAACGCTTACT 14202 ||| ||| || | ||| || |||| | || ||||| || |||| ||||| || Sbjct 417 CAGCCACAGAGAAACTGCCACCACCTCACAACTCTCCCATGTTCACGGGCAACGCGTATA 358 Query 14203 TTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCA 14262 ||| |||||| ||| || || | | || || || || | | | | | || Sbjct 357 TTGTGGTCACACGGACCTTTGTACAGCACATCTTCGAGAACCCCACAGCGCAGCAGTTCC 298 Query 14263 TGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAA 14322 | | ||| ||||||| |||||||||||||||||| | ||||||||| | | | | Sbjct 297 TCGAGTGGGCGAAGGACACCTACAGCCCCGACGAGCACGTCTGGGCCACCCTCAACCGCA 238 Query 14323 TGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGG 14382 || ||| ||| |||| || ||| | ||||| | | ||||||||| | Sbjct 237 TGCCCGGTGTGCCGGGGGCCATGCCCCAGAGTGACAAGTTCCAGCAGTCGGACATGAACG 178 Query 14383 CCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGT 14442 || | | | | || |||||||| ||| ||||| || | || || || || | | Sbjct 177 CCCTGCCCCGCCTGGTGAAGTGGCAGTACCTGGAGGGCGACACCAGCAAGGGCGCGCCCT 118 Query 14443 ACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGA 14502 |||| || ||| |||| ||| | | || ||||||||| |||| || |||||| Sbjct 117 ACCCACCCTGCACCGGCCAGCACCAGCGCTCCGTCTGCATCTACGGGGTGGGTGACGTGC 58 Query 14503 AGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 |||||| ||| | | ||||| || ||||||||||||||| Sbjct 57 CCTGGCTGCTCCAGCAGCAC-CACCTCTTGGCCAACAAGTTCGAC 14 >seq48775 Length=7598 Score = 131 bits (144), Expect = 2e-25 Identities = 255/373 (68%), Gaps = 24/373 (6%) Strand=Plus/Minus Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGATGTTCGAGCGCCTC 13751 || |||||||||||| ||| ||| || |||||| |||||| |||||||| ||| Sbjct 865 TTCCCCATCGCCTAC---ATCATGACCCTGCACAAGGAGTTCGAGACCTTCGAGCGGCTC 809 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTC--CG 13809 | ||||| | ||| || || ||| |||||||| |||||||||| ||||| | || Sbjct 808 TTCAGGGCGTTGTACATGCCCCAAAACGTCTACTGCATCCACGTGGATGCCAAGGCGCCG 749 Query 13810 GCGACGAGTTCATCCGG--GGCGTCTCGGCCATCGCCAGGTG-----CTTCCCTAACGTG 13862 || | | | ||| ||| | || |||| |||| |||||| || | Sbjct 748 GCCCC-----CTTTCGGCAGGCA----GTGCAGCGCCTGGTGGGCTGCTTCCCCAATGCC 698 Query 13863 GCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGAC 13922 ||| ||| |||| || | |||||||||||| | ||| ||| ||||||| Sbjct 697 TTCCTCGCCTCCCGGGTGGAGCGGGTGGTGTACGGCGGCATCTCCCGCCTGCGGGCCGAC 638 Query 13923 CTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTG 13982 ||| |||| | |||||| ||||| |||| ||| | |||||||||||| Sbjct 637 CTCCACTGCGCGAGAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGCTCAACACC 578 Query 13983 TGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTG 14042 ||||| ||||||||| | ||||||||||||||||| || ||| |||||||| ||| Sbjct 577 TGCGGCCAGGACTTCCCCTTGAAGACCAACCTGGAGATTGTCCGGCTGCTGAAGGGCCTC 518 Query 14043 GGCGGCAAGAACG 14055 | || ||||||| Sbjct 517 AGAGGGAAGAACG 505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658222921386240