Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq48153 158 3e-33 >seq48153 Length=1917 Score = 158 bits (174), Expect = 3e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 ||||| ||||| ||||| || || || | ||||| | |||||||||||||||||||| Sbjct 1445 GTGGATTCTTTCTGGATATTGTAGTCGGAGAGGGTACGGCCATCTTCCAGCTGCTTGCCA 1504 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| || | || || || ||||||| |||||||||||||||||||| || Sbjct 1505 GCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 1564 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| || ||||||||| | || ||||| || ||||| ||||| ||||| || ||| Sbjct 1565 ACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 1624 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | |||||| Sbjct 1625 TTGACAAAGATCTGCAT 1641 Score = 158 bits (174), Expect = 3e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 ||||| ||||| ||||| || || || | ||||| | |||||||||||||||||||| Sbjct 1673 GTGGATTCTTTCTGGATATTGTAGTCGGAGAGGGTACGGCCATCTTCCAGCTGCTTGCCA 1732 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| || | || || || ||||||| |||||||||||||||||||| || Sbjct 1733 GCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 1792 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| || ||||||||| | || ||||| || ||||| ||||| ||||| || ||| Sbjct 1793 ACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 1852 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | |||||| Sbjct 1853 TTGACAAAGATCTGCAT 1869 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || ||||| || || |||||||| || || | ||||| | |||||| Sbjct 1202 AGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCT 1261 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||| || | || || || || || | || ||||| ||| Sbjct 1262 TCCAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGGGGGGATGCCCTCCTTATCC 1321 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || ||||||||| | || ||||| || ||||| ||| Sbjct 1322 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1381 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| | |||||| Sbjct 1382 TTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158220817337135