Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq49365 123 2e-23 seq6344 91.5 1e-13 >seq49365 Length=32034 Score = 123 bits (136), Expect = 2e-23 Identities = 127/166 (77%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 29713 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29772 |||||| ||||| || || |||||||| ||||| || || ||||||||||| || || || Sbjct 26103 TAGCCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCGATATTGAAAGG 26162 Query 29773 CACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCT 29832 ||| || || ||||| || || |||||||| ||||| ||||| || | || | | Sbjct 26163 CACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCATCCTTTAG 26222 Query 29833 CACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878 || |||||||| || | ||||||||||||||| | ||||| ||| Sbjct 26223 AACATAAAACTGGCAAAGGGCATGGCACGGAGGCAAAGCCATCAGA 26268 Score = 100 bits (110), Expect = 2e-16 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT-GTGCTCGAA 30075 || |||||||||||||| || || || |||||||| || ||||| || || ||||| ||| Sbjct 29435 AAGTGCCTCCACTGGAAACCATAAACTGGTCCCAGATCCCCCTCCTCTCTGGTGCT-GAA 29493 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 ||| ||| |||| || || | || || || || ||||| ||||| || ||||| | Sbjct 29494 ACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTCACACCCTTTGC 29553 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCC 30162 ||||||||||||| ||||| || || Sbjct 29554 AGAGAGCTCTTTGGTATTTGTAGAACC 29580 >seq6344 Length=5584 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || |||||||||||||| |||| || | |||||| | | ||| | |||||| || || Sbjct 2003 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 2062 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||||||||| || ||||| |||||||||| | ||||| |||||| Sbjct 2063 ATGGAGAACCAGGTTTTTCTTCCCATTATCAGTGCATTCTGTTTACCT 2110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405852832802314