Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq48153 104 5e-17 >seq48153 Length=1917 Score = 104 bits (114), Expect = 5e-17 Identities = 151/211 (72%), Gaps = 7/211 (3%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || || || ||||||||||| || | | || | |||||||| | Sbjct 1207 CAAG-TGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCTTCCA 1265 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||||| |||||||| ||||||||||| |||| | ||| || ||||| || || | Sbjct 1266 GCTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGGGGGGATGCCCTCCTTATCCTGGA 1325 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTT 152073 | || ||||| |||| | | |||| ||| ||| || || || || || || | Sbjct 1326 TCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTCT 1382 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||| || ||||| || |||| |||||| Sbjct 1383 TGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1413 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| | || || ||||| ||||| ||||| |||| | || | |||||| Sbjct 1430 AGCACGAGATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAGAGGGTACGGCCATCT 1489 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | || |||||||| || Sbjct 1490 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCC 1549 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||||| |||| | | |||| ||| ||| || || || || || Sbjct 1550 TGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 1606 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || ||||| || |||| |||||| Sbjct 1607 GTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1641 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| | || || ||||| ||||| ||||| |||| | || | |||||| Sbjct 1658 AGCACGAGATGTAAGGTGGATTCTTTCTGGATATTGTAGTCGGAGAGGGTACGGCCATCT 1717 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | || |||||||| || Sbjct 1718 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCC 1777 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||||| |||| | | |||| ||| ||| || || || || || Sbjct 1778 TGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 1834 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || ||||| || |||| |||||| Sbjct 1835 GTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCAT 1869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152893900055029