Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurypyga_20helias_20[refseq_20GCF_5F000690775.1_202014-05-13] 62,699 sequences; 1,088,019,637 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq21154 170 3e-37 seq61966 107 3e-18 >seq21154 Length=17606 Score = 170 bits (188), Expect = 3e-37 Identities = 183/242 (76%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303 ||||||| |||||| |||||||| ||||| ||| ||| |||||||| || |||||||| Sbjct 1581 ATGAGTCTAGTGGTTTGGAACAGCTGCTCATCATCCCACTCTGGATGCTCCTGTTTCAGG 1522 Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363 || || || |||| ||||||||||| ||||| || || || |||||||| | || || Sbjct 1521 ACGTCACAGACCCGATTGTGTTCCCTCAGCCATATTGTAGCATACATCATCAAGCCTGGG 1462 Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423 |||| ||||| |||| || || || | | ||| || ||| || || | ||||| Sbjct 1461 ACCAAACCAAACACCTCCTGCCCAACTGAAAACTGCAAGTGTTCAGGTACGTGAGGAGGG 1402 Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483 |||||||| | |||| ||| || |||| || ||||||||||| |||||||||||| Sbjct 1401 TAGATCATCTCTGCCTGAGTGTCCTTCACCGTTGGTGGATACATTTCTCCGTCAATCATC 1342 Query 9484 TG 9485 || Sbjct 1341 TG 1340 Score = 145 bits (160), Expect = 1e-29 Identities = 211/298 (71%), Gaps = 0/298 (0%) Strand=Plus/Minus Query 8289 GGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGC 8348 |||| || | || ||||| ||||| || ||| | |||| || ||| | | || Sbjct 3570 GGAAAGCAGTGAAAGGACAGCCCTTCACATTGTTGCAGATGAGCTTCTGTAAGGAGGCAG 3511 Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408 | ||||| || | || |||| | ||| || |||||||| |||||||||||| |||||| Sbjct 3510 TATTGACTATTTCAAAGCCCAGCTTTCCACCAAAGGTGCTAGGCTTCCAGTACTCCGGGG 3451 Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468 ||||||| | || |||| || || || | |||||||| || || | ||| | || Sbjct 3450 AGCAGATAGCATTGCCCATCAGTCCCTTCAAAGAGAACGGTGCTCCAATCTCCACCATTG 3391 Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528 | ||||| ||||| || || || |||||||| || | || || | |||||||||| Sbjct 3390 TTTCACCAAAGATTGCACCTGGTCGTGGCTTTTCTACAAGGAGGCCTGGATACAGCTCCA 3331 Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 ||| || | |||||| ||||| || ||||| || || || || ||||||||||| Sbjct 3330 TAGCATCAATGTCTCCATAAAGCTCCTCCAGTTCAGCTGCCATTTCTTTTTCTCCTGT 3273 >seq61966 Length=1849 Score = 107 bits (118), Expect = 3e-18 Identities = 209/309 (68%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 8277 CATCGGGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACT 8336 |||| || || | ||||| | |||| ||| ||| |||||| || || || || Sbjct 666 CATCCGGCACATGAAACGCCACGTACGGGCACTTCTTCACGTTGAGGCAAACGAGTTTCT 607 Query 8337 GAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCC 8396 | | ||| |||| || ||| | || || |||| || || || ||||| |||| Sbjct 606 TGAGGGATGCTGTCTTCACTATCTCAAAACCAGTTGCTCCACCAAACGTACTGGGTTTCC 547 Query 8397 AGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCA 8456 ||||| | |||||||||||| ||| | | || || || ||||| |||||||| || | Sbjct 546 AGTACTCTGGGGAGCAGATGGGGTTTCCAAGAAGCCCCTTCAGGGAAAACGGAGCTCCAA 487 Query 8457 ACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGG 8516 ||| | ||||| || || || || | ||||| |||| || || | || || || | Sbjct 486 TCTCCACCATGCTTTCTCCAAAAATACCATTGGGTTGGGGTTTCTCAAGCAGCAAGCCAG 427 Query 8517 TGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCT 8576 || | ||||| ||| || | ||||||||| || || || || || || |||||| Sbjct 426 GATAAAACTCCAGAGCATCAATGTCTCCGTACAGCTCCTCCAGCTCAGCCGCCTTCTCCT 367 Query 8577 TTTCTCCTG 8585 ||||||| Sbjct 366 CCTCTCCTG 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716314956768960