Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq933 122 6e-23 seq977 98.7 7e-16 >seq933 Length=2485477 Score = 122 bits (134), Expect = 6e-23 Identities = 93/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| || ||| ||||||| || | |||||||||| |||||||||| || ||||||||||| Sbjct 1595228 CTTGAGCTCCCTGCTGAGCACGATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGG 1595169 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399 ||| |||||||| || ||| ||||||| |||||| |||||||||| ||| Sbjct 1595168 AATGGAGAACCAGGTTTTTCTACCCATGATCACTGCATTCTGTTTACCTG 1595119 >seq977 Length=740791 Score = 98.7 bits (108), Expect = 7e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||||||||| || ||||||||||| || ||||| || ||||| | ||| || | Sbjct 265043 CTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAACCCATAAACTGGTCCCAAATCCCCCT 265102 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | |||||| |||||| | ||||| | || | |||||||| |||||||||| Sbjct 265103 CCTCTCTGGTGCTAAAACCTTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAA 265162 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181 | | ||| || ||| || ||||||||| Sbjct 265163 TCTTCACACCTTTTGCAGAGAGCTCTTTG 265191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361225386682613