Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq206 156 5e-33 seq726 120 4e-22 >seq206 Length=116188 Score = 156 bits (172), Expect = 5e-33 Identities = 205/282 (73%), Gaps = 4/282 (1%) Strand=Plus/Minus Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 |||| |||||| | || | | |||||||||||||||||||| | |||||||||||| Sbjct 110807 GGGCACGCCGTCGGGGCCGATGAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCA 110748 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 || || |||||| ||| ||| |||| | ||| |||| | ||| ||| || Sbjct 110747 GACGGGGGACCAGATGATGTACTGCGGGTTGGTCATCAGCGAGGAGGGGTCATCGTGCGG 110688 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACC 83296 ||||| |||||| ||||||| |||||| || || || |||| | |||| ||| Sbjct 110687 GAAGGGCAGCGCCTCTTTCAGGAAGGTGAAGAGGGGGTGCGCGTCCTTCC--CGTTCACC 110630 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 |||||||||||||| | || || || |||| | ||||||| || ||||| ||||||| | Sbjct 110629 TCGCACTTCTCGAACATGATGAAATTGGGCTTGTAGCCGTTGCCGGGACGTACGTGCTCC 110570 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGA 83398 || || ||| |||||| | |||| || || |||||| || Sbjct 110569 AGCGAGAGCAGGATCTCCTCGTTCTTAGCATTCTCCTGGAGA 110528 >seq726 Length=1959404 Score = 120 bits (132), Expect = 4e-22 Identities = 223/314 (71%), Gaps = 20/314 (6%) Strand=Plus/Minus Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCAC--GGCCAGGGTCTGGCAGCGGTGGCTGTACCTG 83113 ||| ||| || |||||||||||||| || | ||| | |||| ||||||| | Sbjct 1055503 GAGGAGGCGCTGGATGTCGGGCTCCAGCTGGGC--GGTGGGCGTGCGGGGGCTGTAGCGC 1055446 Query 83114 CGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTG 83173 || | || || || | |||||||| ||||||||| |||||||||| | ||| | Sbjct 1055445 CGGAAAGGTTCCCCCTCGGGACCCACCAGGAACTTCTCAAAGTTCCAGGAGATGTCAGAG 1055386 Query 83174 CGGCACACTGGAGACCAGGCAATGAGCTGGGGGTC-GC--TCACGAGCGTGCTCATGTCG 83230 || | ||| ||| ||||| | || |||| || || ||| | |||| | |||| Sbjct 1055385 CGCCGCACGGGACTCCAGGTGAGGAAGCGGGGCTCAGCCATCAGGTGCGTTGCCTCGTCG 1055326 Query 83231 TCGCTAGGCGCCGGCAGG---GCCTCTCGTAGGAAGGCGAAGAGCGGATG--TGCCCTTG 83285 ||| ||||| |||||| |||| || ||| ||||||||| || || || ||| | Sbjct 1055325 --GCT-GGCGCGGGCAGGTGAGCCT-TC--AGGTAGGCGAAGACGGGGTGGGTGTCCT-G 1055273 Query 83286 CACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGAC 83345 | ||||| |||| |||||||| |||||| | ||||| ||||||||||| ||| || | Sbjct 1055272 C-CCGTTCACCTGGCACTTCTGGAAGAGGGTGAAGTTGGGCTCGAAGCCACCCCCTGGCC 1055214 Query 83346 GGACGTGCTTCAGG 83359 | |||||||||||| Sbjct 1055213 GCACGTGCTTCAGG 1055200 Score = 104 bits (114), Expect = 3e-17 Identities = 118/156 (76%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447 || |||||| || || ||||| || ||||| || ||||| ||||||| ||| | || Sbjct 1055079 TTACCTGGTAGCCAAATTGGTTGCAGGGGAAGCCCAGCACGACCAGCCGCCGGGGA--TA 1055022 Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507 | | | ||||||| ||| | ||| ||||| ||||| ||||| | ||||||||||| | Sbjct 1055021 GCGGGCT-TGCAGCTGGTTGAGCTGGGTGTAGTCCCGCACCGTAGTGCCTCAGAGGGATG 1054963 Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAGA 83543 | |||||||||||||| | || ||||| || |||| Sbjct 1054962 CCACGTTCTCGATGAGGACCACGCGGCCGCGGAAGA 1054927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608752182804520