Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq206 156 5e-33
seq726 120 4e-22
>seq206
Length=116188
Score = 156 bits (172), Expect = 5e-33
Identities = 205/282 (73%), Gaps = 4/282 (1%)
Strand=Plus/Minus
Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178
|||| |||||| | || | | |||||||||||||||||||| | ||||||||||||
Sbjct 110807 GGGCACGCCGTCGGGGCCGATGAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCA 110748
Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238
|| || |||||| ||| ||| |||| | ||| |||| | ||| ||| ||
Sbjct 110747 GACGGGGGACCAGATGATGTACTGCGGGTTGGTCATCAGCGAGGAGGGGTCATCGTGCGG 110688
Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACC 83296
||||| |||||| ||||||| |||||| || || || |||| | |||| |||
Sbjct 110687 GAAGGGCAGCGCCTCTTTCAGGAAGGTGAAGAGGGGGTGCGCGTCCTTCC--CGTTCACC 110630
Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356
|||||||||||||| | || || || |||| | ||||||| || ||||| ||||||| |
Sbjct 110629 TCGCACTTCTCGAACATGATGAAATTGGGCTTGTAGCCGTTGCCGGGACGTACGTGCTCC 110570
Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGA 83398
|| || ||| |||||| | |||| || || |||||| ||
Sbjct 110569 AGCGAGAGCAGGATCTCCTCGTTCTTAGCATTCTCCTGGAGA 110528
>seq726
Length=1959404
Score = 120 bits (132), Expect = 4e-22
Identities = 223/314 (71%), Gaps = 20/314 (6%)
Strand=Plus/Minus
Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCAC--GGCCAGGGTCTGGCAGCGGTGGCTGTACCTG 83113
||| ||| || |||||||||||||| || | ||| | |||| ||||||| |
Sbjct 1055503 GAGGAGGCGCTGGATGTCGGGCTCCAGCTGGGC--GGTGGGCGTGCGGGGGCTGTAGCGC 1055446
Query 83114 CGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTG 83173
|| | || || || | |||||||| ||||||||| |||||||||| | ||| |
Sbjct 1055445 CGGAAAGGTTCCCCCTCGGGACCCACCAGGAACTTCTCAAAGTTCCAGGAGATGTCAGAG 1055386
Query 83174 CGGCACACTGGAGACCAGGCAATGAGCTGGGGGTC-GC--TCACGAGCGTGCTCATGTCG 83230
|| | ||| ||| ||||| | || |||| || || ||| | |||| | ||||
Sbjct 1055385 CGCCGCACGGGACTCCAGGTGAGGAAGCGGGGCTCAGCCATCAGGTGCGTTGCCTCGTCG 1055326
Query 83231 TCGCTAGGCGCCGGCAGG---GCCTCTCGTAGGAAGGCGAAGAGCGGATG--TGCCCTTG 83285
||| ||||| |||||| |||| || ||| ||||||||| || || || ||| |
Sbjct 1055325 --GCT-GGCGCGGGCAGGTGAGCCT-TC--AGGTAGGCGAAGACGGGGTGGGTGTCCT-G 1055273
Query 83286 CACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGAC 83345
| ||||| |||| |||||||| |||||| | ||||| ||||||||||| ||| || |
Sbjct 1055272 C-CCGTTCACCTGGCACTTCTGGAAGAGGGTGAAGTTGGGCTCGAAGCCACCCCCTGGCC 1055214
Query 83346 GGACGTGCTTCAGG 83359
| ||||||||||||
Sbjct 1055213 GCACGTGCTTCAGG 1055200
Score = 104 bits (114), Expect = 3e-17
Identities = 118/156 (76%), Gaps = 3/156 (2%)
Strand=Plus/Minus
Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447
|| |||||| || || ||||| || ||||| || ||||| ||||||| ||| | ||
Sbjct 1055079 TTACCTGGTAGCCAAATTGGTTGCAGGGGAAGCCCAGCACGACCAGCCGCCGGGGA--TA 1055022
Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507
| | | ||||||| ||| | ||| ||||| ||||| ||||| | ||||||||||| |
Sbjct 1055021 GCGGGCT-TGCAGCTGGTTGAGCTGGGTGTAGTCCCGCACCGTAGTGCCTCAGAGGGATG 1054963
Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAGA 83543
| |||||||||||||| | || ||||| || ||||
Sbjct 1054962 CCACGTTCTCGATGAGGACCACGCGGCCGCGGAAGA 1054927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608752182804520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |