Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq470 457 6e-124 seq576 95.1 8e-15 >seq470 Length=2661214 Score = 457 bits (506), Expect = 6e-124 Identities = 777/1113 (70%), Gaps = 26/1113 (2%) Strand=Plus/Plus Query 107523 ATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGAC 107582 |||||||| || |||||| || |||||| || |||| | |||||| || | Sbjct 390323 ATCAACTGCTCGGGGATCGTCCGCGGGGACGAGAAAGCCATCCGGGAGGCCCAGCTCAGC 390382 Query 107583 AACCTGGAAGTGAAGAA-AAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAAC 107641 |||||||| ||| ||| ||| ||| ||| || || || | | ||||| ||||| | Sbjct 390383 AACCTGGAGGTGGCGAACAAAAGGGTTGCC-CTGACGCCCAGCGAGTACCTGAACATGGC 390441 Query 107642 CAGAGACTGTGAGCGCTTCAAGG---CCCAAAGGAAGTTCATACAGTTCCCACTGAGTAA 107698 || ||||| | ||||||||| ||| || ||||| ||||||| ||||| | Sbjct 390442 GAGGGACTGCGGCAGCTTCAAGGAGACCC---GGCGATTCATTGAGTTCCCGCTGAGCCA 390498 Query 107699 AGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTT 107758 || ||| | || |||||||| |||||||| ||||| |||| | || || || | || Sbjct 390499 GGAGGAGGTGGAGTTCCCCATCGCCTACTCCATGGTCATCCACAACAAAATCGAGATGTT 390558 Query 107759 TGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGT 107818 || ||||| ||||| || | |||||||| |||||||| ||||| |||||| | || Sbjct 390559 CGAGCGGCTCCTGCGGTCCCTCTATGCCCCCCAGAACATCTACTGCGTCCACATTGACAG 390618 Query 107819 GAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGT 107878 ||||| || | |||||||| ||||| || ||||||| | |||||||||||||||| Sbjct 390619 CAAGTCTCCGGCCACTTTCAAGGAGGCTGTACAGGCCATCGTGGCCTGCTTCCCCAATGT 390678 Query 107879 CTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGA 107938 ||| |||| || | ||| ||||| ||||||||||||||| | |||||||||| Sbjct 390679 CTTTGTGGCTAGCCACCTGGAAAATGTGGTCTATGCCTCCTGGTCCCGGCTGCAAGCTGA 390738 Query 107939 CCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATAC 107998 ||| ||||| ||| | ||| || | | ||| | ||||||||| ||| | || || || Sbjct 390739 CCTCAACTGCATGCAGGACCTGTTGCGGAGTCCCGTGCCATGGCGCTACGTCCTCAACAC 390798 Query 107999 ATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTT 108058 ||||| |||||||||||||| |||||||| |||||||| ||| ||||| ||| || | Sbjct 390799 CTGCGGCACAGACTTCCCCATCAAGACCAACGCCGAGATCATCCGTGCCCTGAAGGTGCT 390858 Query 108059 GAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAA 108118 | |||| |||||| |||||||| ||| || || ||| | |||||| | Sbjct 390859 GCAGGGGCGGAACAGCATGGAGTCAGAGAAGCCCTCACCCCTCAAGCGGCAGCGCTGGCA 390918 Query 108119 ATACCGCTATGAGGTGACAGACACACTGTACCCTAC---CAGCAAGA-TGAAGGACCCTC 108174 |||| | | || ||| |||| | || | || | || ||| ||| || | Sbjct 390919 GTACCACCACGAAGTG-GGGACA---TTTATCTCACGGACTGCCAGAGAGAAACTGCCGC 390974 Query 108175 CCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTG 108234 | || | || | |||||||||||||| ||||| || |||||| | || ||||| | Sbjct 390975 CGCCGCACAACTACCCCATGTTCACAGGCAATGCATACATTGTGGTTACCCGGGCCTTCG 391034 Query 108235 TCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCT 108294 | || || |||| || ||||| | | | || | | || |||| ||| ||||||| Sbjct 391035 TGCAGCACATCTTCGAGAACCCCACAGCTCAGCAGTTCCTCGAGTGGGCCAAGGACACCT 391094 Query 108295 ATAGCCCCGACGAACACCTCTGGGCCACCCT--TCAGCGTGCTCCGTGGATGCCTGGCTC 108352 | ||||| || || || ||||||||||||| | || ||| ||| | |||| ||| | Sbjct 391095 ACAGCCCTGATGAGCATGTCTGGGCCACCCTCAACCGCATGC-CCG-GCGTGCCCGGCGC 391152 Query 108353 TGTTCCTAGCCA---CCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGT 108409 | || ||| | |||||| || |||| ||||||| |||| | || | || || Sbjct 391153 CATGCC---CCAGAGCGACAAGTACCAGCTCTCGGACATGAATGCCCTGCCCCGCCTGGT 391209 Query 108410 CAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGG 108469 |||||||||||||| ||||| || ||||| ||| || || || | |||||| | || Sbjct 391210 CAAGTGGCAGTACCTAGAGGGTGACACCAGCAAGGGTGCACCCTACCCGCCCTGCACCGG 391269 Query 108470 AATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAA 108529 || | | | ||| |||| | ||||||| || ||| ||| |||| | || ||| | Sbjct 391270 CCAGCACCAGCGCGCCGTCTGTGTCTACGGGGTGGGCGACGTGTCCTGGGTGCTACAGCA 391329 Query 108530 CCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTT 108589 || ||||||||||| |||||||| ||||| | |||||| ||| || | | ||| | Sbjct 391330 GCACCACCTCTTGGCCAACAAGTTCGACCCCATGGTGGACGATGCCGCCATCATGTGTCT 391389 Query 108590 AGAAGAGTACCTACGTCATAAGGCCATCTATGG 108622 || ||| |||| || || | |||| |||| || Sbjct 391390 CGAGGAGCACCTGCGCCACAGGGCCCTCTACGG 391422 >seq576 Length=3428205 Score = 95.1 bits (104), Expect = 8e-15 Identities = 229/343 (67%), Gaps = 4/343 (1%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || || || ||||| ||| || || ||||| ||||| || ||||| || | || Sbjct 1683832 CCTCTCAGCAATGAAGAAGCAGAATTTCCAATTGCTTACTCAATAGTGGTTTATCACAAA 1683773 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||| | |||| | || || || | | |||||||||||||| | ||||| | Sbjct 1683772 ATTGAGATGCTTGATAGACTTCTAAGATCAATCTATGCCCCTCAGAATTTTTACTGCATT 1683713 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 || || || ||||| |||||| |||| | || || |||| ||| | || || Sbjct 1683712 CATGTTGACAAAAAGTCTCCAGAGTCTTTTTTTGCTGCTGTGAAGGGCATAGTCTCATGT 1683653 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 || |||||||| || |||| |||| | || || ||||| || ||| ||| Sbjct 1683652 TTTGAGAATGTCTTTATTTCCAGCCAGTTAGAGAGTGTTGTGTATGCTTCATGGAGCAGG 1683593 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985 ||||| || ||| | ||||| ||| |||| | || ||| | ||| | | ||||| | Sbjct 1683592 GTGCAGGCAGACATTAACTGCATGAAAGA-TCTCTACAG-GAAAAGTTCAAACTGGAAAT 1683535 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028 || || | || || || | ||||| || ||||||||||| Sbjct 1683534 ACCTAATAAACCTTTGTGGTATGGACTTTCCTATAAAGACCAA 1683492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348243914344062