Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq431 116 3e-21
seq780 102 7e-17
seq515 95.1 1e-14
seq12 86.0 6e-12
>seq431
Length=331394
Score = 116 bits (128), Expect = 3e-21
Identities = 120/157 (76%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||||| || ||||| || ||||| ||||| |||||||| || || || ||
Sbjct 62393 ACCTCATCTTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTC 62452
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
||||| || ||| ||||| ||||| ||||| || || |||||||||||||| || |||
Sbjct 62453 CCCAAGTTCTGCTGATTGCTCTTTCGGTTGCAAGAGTCTTTGTAGAGCATGTATGGTGTG 62512
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204
|| ||||| ||| || || ||||| || |||||
Sbjct 62513 CCAGTCTCCGTCTGTGATTCAATGATAGCGTACCACA 62549
>seq780
Length=11850152
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31191 ACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGT 31250
||||||| || || || ||||| ||||| ||||| || |||||| | || || || ||
Sbjct 4731412 ACATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCA 4731353
Query 31251 CCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|||| | || | || || | || ||||||||||||| | || |||||||
Sbjct 4731352 GTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACC 4731293
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
||||||| || || || |||||||| ||| ||||||| || || || || |
Sbjct 4731292 AGCAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACA 4731233
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||| || || ||||| || || ||||| || || | |||||||| ||
Sbjct 4731232 ACATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGG 4731184
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| ||||| ||||| || |||||| | || || || ||
Sbjct 4730955 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 4730896
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | || ||||||||||||| | || || |||||
Sbjct 4730895 TGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 4730836
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || ||||||||||| ||| ||||||| || || || || ||
Sbjct 4730835 GCAGCGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAA 4730776
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| || || ||||| || || ||||| || || | |||||||| ||
Sbjct 4730775 CATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGG 4730728
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| |||| ||||| || |||||| | || || || ||
Sbjct 4731183 CATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 4731124
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | || ||||||||||||| | || ||||||||
Sbjct 4731123 TGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCA 4731064
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || || |||||||| ||| ||||||| || || || || ||
Sbjct 4731063 GCAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAA 4731004
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| || |||||||| || || ||||| || || | ||||| || ||
Sbjct 4731003 CATCCAGAAAGAATCCACCCTCCATCTTGTGCTGCGTCTGAGAGGTGG 4730956
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|||||||| || || || ||||| |||| ||||| || |||||| | || || || ||
Sbjct 4731641 AACATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCC 4731582
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|||| | || | || || | || ||||||||||||| | || ||||||
Sbjct 4731581 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGAC 4731522
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||||| || || || |||||||| ||| ||||||| || || || ||
Sbjct 4731521 CAGCAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTAC 4731462
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGG 31416
||||| || || ||||| || || ||||| || || | ||||| ||
Sbjct 4731461 AACATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGTCTGAGAGG 4731415
>seq515
Length=1665176
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| ||||| ||||| || |||||| | || ||||| ||
Sbjct 31544 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAG 31603
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | || ||||||||||||| | || ||||| ||
Sbjct 31604 TGACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCA 31663
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
||| | || || || |||||||| ||| ||||||| | | | || | || || |
Sbjct 31664 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGA-TGGACGCACGCTCTCTGACTACA 31722
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||| || || ||||| || || ||||| || || | |||||||| ||||
Sbjct 31723 ACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGGTA 31773
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| ||||| ||||| || |||||| | || ||||| ||
Sbjct 30176 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAG 30235
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | || ||||||||||||| | || | || ||
Sbjct 30236 TGACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 30295
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
||| | || || || |||||||| ||| ||||||| | | | || | || || |
Sbjct 30296 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGA-TGGACGCACGCTCTCTGACTACA 30354
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||| || || ||||| || || ||||| || || | |||||||| ||
Sbjct 30355 ACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 30403
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| ||||| ||||| || |||||| | || ||||| ||
Sbjct 30404 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAG 30463
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | || ||||||||||||| | || | || ||
Sbjct 30464 TGACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 30523
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
||| | || || || |||||||| ||| ||||||| | | | || | || || |
Sbjct 30524 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGA-TGGACGCACGCTCTCTGACTACA 30582
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||| || || ||||| || || ||||| || || | |||||||| ||
Sbjct 30583 ACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 30631
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| ||||| ||||| || |||||| | || ||||| ||
Sbjct 30632 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAG 30691
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | || ||||||||||||| | || | || ||
Sbjct 30692 TGACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 30751
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
||| | || || || |||||||| ||| ||||||| | | | || | || || |
Sbjct 30752 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGA-TGGACGCACGCTCTCTGACTACA 30810
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||| || || ||||| || || ||||| || || | |||||||| ||
Sbjct 30811 ACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 30859
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| ||||| ||||| || |||||| | || ||||| ||
Sbjct 30860 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAG 30919
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | || ||||||||||||| | || | || ||
Sbjct 30920 TGACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 30979
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
||| | || || || |||||||| ||| ||||||| | | | || | || || |
Sbjct 30980 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGA-TGGACGCACGCTCTCTGACTACA 31038
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||| || || ||||| || || ||||| || || | |||||||| ||
Sbjct 31039 ACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 31087
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| ||||| ||||| || |||||| | || ||||| ||
Sbjct 31088 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAG 31147
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | || ||||||||||||| | || | || ||
Sbjct 31148 TGACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 31207
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
||| | || || || |||||||| ||| ||||||| | | | || | || || |
Sbjct 31208 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGA-TGGACGCACGCTCTCTGACTACA 31266
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||| || || ||||| || || ||||| || || | |||||||| ||
Sbjct 31267 ACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 31315
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| ||||| ||||| || |||||| | || ||||| ||
Sbjct 31316 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAG 31375
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | || ||||||||||||| | || | || ||
Sbjct 31376 TGACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 31435
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
||| | || || || |||||||| ||| ||||||| | | | || | || || |
Sbjct 31436 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGA-TGGACGCACGCTCTCTGACTACA 31494
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||| || || ||||| || || ||||| || || | |||||||| ||
Sbjct 31495 ACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 31543
>seq12
Length=3827242
Score = 86.0 bits (94), Expect = 6e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| || || || || ||||| || ||||||||||| |||||| || ||||||||| ||
Sbjct 3384419 GCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATATTTTGGCTG 3384478
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTT 58072
|||||| | ||||||||||| || ||||| ||
Sbjct 3384479 AAGAAAAGGGGCCTGATGCCTGGACTGACTTT 3384510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445733730894960
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