Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq123 134 1e-26
seq12 107 2e-18
>seq123
Length=3649919
Score = 134 bits (148), Expect = 1e-26
Identities = 110/134 (82%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|| |||||||| ||||||||||| ||||| || | ||| ||||| ||||||| ||| ||
Sbjct 2429723 TCATCTCTACTGATTAGTTCATTTGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 2429664
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| |||||| || | ||||| |||||||||||||| ||||| ||||| |||||||| |||
Sbjct 2429663 AGCCAAAAAATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 2429604
Query 11774 ACTACTCTTTCTCC 11787
||||| | |||||
Sbjct 2429603 ACTACACGCTCTCC 2429590
>seq12
Length=3827242
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|| ||||| || || |||||||| || || || | ||| ||||||| || | ||| ||
Sbjct 3384537 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTTTTCTTC 3384478
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| |||||||||||||||||| ||||| |||||||| || || || || || ||||| ||
Sbjct 3384477 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 3384418
Query 11774 ACTACTCTTTCTCC 11787
|| ||||| || ||
Sbjct 3384417 ACCACTCTCTCACC 3384404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468490462988720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |