Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq780 98.7 7e-16 >seq780 Length=11850152 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||||| | | || | ||| |||||||| ||||| || |||||||| || Sbjct 4730954 TGCCACCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTG 4731013 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || | | | | ||||| | || |||||||| | |||| || || |||||| | Sbjct 4731014 ACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGG 4731073 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| ||||| ||||| || ||| ||| ||| | || ||||| || || || | Sbjct 4731074 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGA 4731133 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || | ||| ||||| || || |||| || || ||||| || ||||| Sbjct 4731134 CCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 4731182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362153320372083