Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq4113 123 4e-24
seq827 123 4e-24
>seq4113
Length=309
Score = 123 bits (136), Expect = 4e-24
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 46 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCAT 105
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || || ||||| |||| || | |||| || ||||
Sbjct 106 CCGGCGCCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGAC 165
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || ||||| ||||||| ||| ||| |||| || || || ||| |||||
Sbjct 166 GCGCGGCGTGCTGAAGGTCTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGA 225
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||||| || || ||||| ||||| |||||||
Sbjct 226 GCACGCCAAGCGCAAGACGGTCACGGCCATGGA 258
>seq827
Length=3065556
Score = 123 bits (136), Expect = 4e-24
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 2166975 CGCCAAGCGCCACCGCAAGGTGCTGCGGGACAACATCCAGGGCATCACCAAGCCGGCCAT 2166916
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || || ||||| |||| || | |||| || ||||
Sbjct 2166915 CCGGCGCCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGAC 2166856
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || ||||| ||||||| ||| ||| |||| || || || ||| |||||
Sbjct 2166855 GCGCGGCGTGCTGAAGGTCTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGA 2166796
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||||| || || ||||| ||||| |||||||
Sbjct 2166795 GCACGCCAAGCGCAAGACGGTCACGGCCATGGA 2166763
Score = 123 bits (136), Expect = 4e-24
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 2193406 CGCCAAGCGCCACCGCAAGGTGCTGCGGGACAACATCCAGGGCATCACCAAGCCGGCCAT 2193347
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || || ||||| |||| || | |||| || ||||
Sbjct 2193346 CCGGCGCCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGAC 2193287
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || ||||| ||||||| ||| ||| |||| || || || ||| |||||
Sbjct 2193286 GCGCGGCGTGCTGAAGGTCTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGA 2193227
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||||| || || ||||| ||||| |||||||
Sbjct 2193226 GCACGCCAAGCGCAAGACGGTCACGGCCATGGA 2193194
Score = 123 bits (136), Expect = 4e-24
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 2216312 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCAT 2216371
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || || ||||| |||| || | |||| || ||||
Sbjct 2216372 CCGGCGCCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGAC 2216431
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || ||||| ||||||| ||| ||| |||| || || || ||| |||||
Sbjct 2216432 GCGCGGCGTGCTGAAGGTCTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGA 2216491
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||||| || || ||||| ||||| |||||||
Sbjct 2216492 GCACGCCAAGCGCAAGACGGTCACGGCCATGGA 2216524
Score = 123 bits (136), Expect = 4e-24
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 2218156 CGCCAAGCGCCACCGCAAGGTGCTGCGGGACAACATCCAGGGCATCACCAAGCCGGCCAT 2218097
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || || ||||| |||| || | |||| || ||||
Sbjct 2218096 CCGGCGCCTGGCGCGGCGCGGCGGCGTGAAGCGCATCTCGGGGCTCATCTACGAGGAGAC 2218037
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || ||||| ||||||| ||| ||| |||| || || || ||| |||||
Sbjct 2218036 GCGCGGCGTGCTGAAGGTCTTCCTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGA 2217977
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||||| || || ||||| ||||| |||||||
Sbjct 2217976 GCACGCCAAGCGCAAGACGGTCACGGCCATGGA 2217944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79069839418059
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |