Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq123 104 2e-17 >seq123 Length=3649919 Score = 104 bits (114), Expect = 2e-17 Identities = 104/134 (78%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549 || || |||| |||| ||||| |||| |||||| ||||| || | || ||||||||||| Sbjct 2429732 ATTCATACCT-CATCTCTACTGATTAGTTCATTTGAAAAAGTGAGTCCAGGCATTAATCC 2429674 Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGC 21609 ||| || || | |||||| ||||| ||||| | || |||||||| || || || || || Sbjct 2429673 TCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGC 2429614 Query 21610 AGCAAATGCAACTA 21623 ||||| || |||| Sbjct 2429613 TGCAAAAGCTACTA 2429600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531861818320120