Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq780 116 9e-21
seq515 113 1e-19
>seq780
Length=11850152
Score = 116 bits (128), Expect = 9e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| || ||||| | ||| ||| || ||||| || ||||| | || ||||| || |||
Sbjct 4730743 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCT 4730802
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| | || || || ||||||||||| ||||| || | || || ||||| || |||
Sbjct 4730803 TCCAGCTGCTTGCCAGCGAAGATCAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 4730862
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
||||| || || ||||| || || || | || || | || || || || ||||| |||
Sbjct 4730863 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 4730922
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| || || ||||||||
Sbjct 4730923 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4730954
>seq515
Length=1665176
Score = 113 bits (124), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| | || | || || ||||| | ||| ||| || ||||| || ||||
Sbjct 30407 CATG-CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGT 30349
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | |||||||||||| ||||| | || || || || ||||| || | || ||| |
Sbjct 30348 CAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAG 30289
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
|| || ||||| || |||||||| || || || ||||| || || | || || | |
Sbjct 30288 AGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCT 30229
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || | ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 30228 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30177
Score = 113 bits (124), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| | || | || || ||||| | ||| ||| || ||||| || ||||
Sbjct 30635 CATG-CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGT 30577
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | |||||||||||| ||||| | || || || || ||||| || | || ||| |
Sbjct 30576 CAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAG 30517
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
|| || ||||| || |||||||| || || || ||||| || || | || || | |
Sbjct 30516 AGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCT 30457
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || | ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 30456 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30405
Score = 113 bits (124), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| | || | || || ||||| | ||| ||| || ||||| || ||||
Sbjct 30863 CATG-CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGT 30805
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | |||||||||||| ||||| | || || || || ||||| || | || ||| |
Sbjct 30804 CAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAG 30745
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
|| || ||||| || |||||||| || || || ||||| || || | || || | |
Sbjct 30744 AGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCT 30685
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || | ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 30684 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30633
Score = 113 bits (124), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| | || | || || ||||| | ||| ||| || ||||| || ||||
Sbjct 31091 CATG-CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGT 31033
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | |||||||||||| ||||| | || || || || ||||| || | || ||| |
Sbjct 31032 CAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAG 30973
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
|| || ||||| || |||||||| || || || ||||| || || | || || | |
Sbjct 30972 AGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCT 30913
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || | ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 30912 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30861
Score = 113 bits (124), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| | || | || || ||||| | ||| ||| || ||||| || ||||
Sbjct 31319 CATG-CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGT 31261
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | |||||||||||| ||||| | || || || || ||||| || | || ||| |
Sbjct 31260 CAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAG 31201
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
|| || ||||| || |||||||| || || || ||||| || || | || || | |
Sbjct 31200 AGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCT 31141
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || | ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 31140 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31089
Score = 113 bits (124), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| | || | || || ||||| | ||| ||| || ||||| || ||||
Sbjct 31547 CATG-CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGT 31489
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | |||||||||||| ||||| | || || || || ||||| || | || ||| |
Sbjct 31488 CAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAG 31429
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
|| || ||||| || |||||||| || || || ||||| || || | || || | |
Sbjct 31428 AGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCT 31369
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || | ||||| ||||| || ||||| ||||| || || ||||||||
Sbjct 31368 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31317
Score = 109 bits (120), Expect = 1e-18
Identities = 154/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| || ||||| | ||| ||| || ||||| || ||||| | |||||||||||| |||
Sbjct 31756 AGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCT 31697
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378
|| | || || || || ||||| || | || || ||| ||| || ||||| ||
Sbjct 31696 TCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTG---ATCGGGGGGAATGCCTTCCTTG 31640
Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438
|||||||| || || || ||||| || || | || || | || || || | |||||
Sbjct 31639 TCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATG 31580
Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || ||||| ||||| || || ||||||||
Sbjct 31579 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179565784730114
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |