Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq780 113 5e-20
seq552 93.3 5e-14
seq627 91.5 2e-13
seq515 91.5 2e-13
seq917 89.7 6e-13
seq985 86.0 7e-12
>seq780
Length=11850152
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 41985 CCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGA 42044
||||| | ||||| ||| | ||| | ||| ||||| || || ||||| || | |||
Sbjct 4731415 CCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGG 4731474
Query 42045 GTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACG 42104
|| ||| | || || |||||||| ||||| || || || ||||||||||||| || | |
Sbjct 4731475 GTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATG 4731534
Query 42105 CTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCG 42164
| ||||||||| ||| || || | || | | ||||| || | || || ||
Sbjct 4731535 CCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCA 4731594
Query 42165 ACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
| |||||||| ||||| || | ||||| |||||||| ||||| ||
Sbjct 4731595 AGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATGTT 4731641
Score = 109 bits (120), Expect = 6e-19
Identities = 168/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 41969 ATTAATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAAT 42028
||||| ||| | || || || | || | ||| | ||| | ||| ||||| || ||
Sbjct 4730715 ATTAACTTAACAGCCACCCCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGAT 4730774
Query 42029 ATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTG 42088
||||| || | ||| || ||| | || || |||||||| |||||||| || || |||||
Sbjct 4730775 GTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCGCTG 4730834
Query 42089 CTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC 42148
|||||| | || | || ||||||||| ||| || || | || | | |||||
Sbjct 4730835 CTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC 4730894
Query 42149 GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | || || || | |||||||| ||||| || || ||||| |||||||| |||||
Sbjct 4730895 ACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4730954
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| ||||| | ||||| ||| | ||| | ||| || || || || ||||| || | |
Sbjct 4730956 CCACCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGAC 4731015
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || ||| | || || |||||||| ||||| || || || ||||||||||||| ||
Sbjct 4731016 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGA 4731075
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| || ||||||||| ||| || || | || | | ||||| || | || ||
Sbjct 4731076 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACC 4731135
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | |||||||| ||||| || | ||||| |||||||| |||||
Sbjct 4731136 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 4731182
Score = 105 bits (116), Expect = 7e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||| || | ||| || ||| | || || |||||||| ||||| ||
Sbjct 4731220 TCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 4731279
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| || ||||||||||||| || | || ||||||||| ||| || || | ||
Sbjct 4731280 ATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 4731339
Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||| || | || || || | |||||||| ||||| || || ||||| |||
Sbjct 4731340 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 4731399
Query 42198 AAGATTTGCAT 42208
||||| |||||
Sbjct 4731400 AAGATCTGCAT 4731410
>seq552
Length=289539
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 75514 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 75455
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 75454 TATACTAACGAGGA 75441
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 68268 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 68327
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 68328 TACTAACGAGGA 68339
>seq627
Length=236091
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/85 (84%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 154635 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 154576
Query 57067 TACTACCGAGGATTGAATATATAAC 57091
||||| |||||| | | | |||||
Sbjct 154575 TACTAACGAGGAAGGGACAGATAAC 154551
>seq515
Length=1665176
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 25834 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 25775
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 25774 ATACTAACGAGGA 25762
>seq917
Length=7694813
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 7446041 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 7445982
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 7445981 TACTAACGAGGA 7445970
>seq985
Length=4864487
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 4152939 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 4152880
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 4152879 TACTAACGAGGA 4152868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543172989291920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |