Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq780 149 6e-31
seq515 122 9e-23
>seq780
Length=11850152
Score = 149 bits (164), Expect = 6e-31
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || |||||||| || |||||||| |||| | ||||||| | |||
Sbjct 4730971 AGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCT 4731030
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || ||||||||||||||||| ||||| ||||| || ||
Sbjct 4731031 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 4731090
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | || |||| || || || || | || | ||||
Sbjct 4731091 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 4731150
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| ||||| || || || || || |||||
Sbjct 4731151 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 4731182
Score = 145 bits (160), Expect = 8e-30
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || ||||| || || |||||||| |||| | ||||||| | |||
Sbjct 4731427 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCT 4731486
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || ||||||||||||||||| ||||| ||||| || ||
Sbjct 4731487 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 4731546
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | || |||| || || || || | || | ||||
Sbjct 4731547 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 4731606
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||||| ||||| || || || || || ||||| ||
Sbjct 4731607 TTGCCAGTCAAGGTCTTCACAAAGATCTGCATGTT 4731641
Score = 140 bits (154), Expect = 3e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || ||||| || || |||||||| |||| | ||||||| | |||
Sbjct 4731199 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCT 4731258
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | || ||||||||||||||||| ||||| ||||| || ||
Sbjct 4731259 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 4731318
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | || |||| || || || || | || | ||||
Sbjct 4731319 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 4731378
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| || || || || || |||||
Sbjct 4731379 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4731410
Score = 131 bits (144), Expect = 2e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || ||||| || || |||||||| |||| | ||||||| | |||
Sbjct 4730743 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCT 4730802
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || | || |||||||||||||| || ||||| ||||| || ||
Sbjct 4730803 TCCAGCTGCTTGCCAGCGAAGATCAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 4730862
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| ||| | || |||| || || || || | || | ||||
Sbjct 4730863 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 4730922
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| || || || || || |||||
Sbjct 4730923 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4730954
>seq515
Length=1665176
Score = 122 bits (134), Expect = 9e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||||||||| | || ||||| || || |||||||| || | || ||||| | |||
Sbjct 31756 AGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCT 31697
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | ||||| | ||||| ||||| ||||| ||||| || ||
Sbjct 31696 TCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCGGGGGGAATGCCTTCCTTGTCC 31637
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || |||||| ||| | || |||| || || || || | || | ||||
Sbjct 31636 TGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTC 31577
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| || || || || || |||||
Sbjct 31576 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31545
Score = 113 bits (124), Expect = 5e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||||||||| | || ||||| || || |||||||| || | || ||||| | |||
Sbjct 30388 AGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCT 30329
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | ||||| | ||||| || | ||||| ||||| || ||
Sbjct 30328 TCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCC 30269
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || |||||| ||| | || |||| || || || || | || | ||||
Sbjct 30268 TGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTC 30209
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| || || || || || |||||
Sbjct 30208 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30177
Score = 113 bits (124), Expect = 5e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||||||||| | || ||||| || || |||||||| || | || ||||| | |||
Sbjct 30616 AGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCT 30557
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | ||||| | ||||| || | ||||| ||||| || ||
Sbjct 30556 TCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCC 30497
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || |||||| ||| | || |||| || || || || | || | ||||
Sbjct 30496 TGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTC 30437
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| || || || || || |||||
Sbjct 30436 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30405
Score = 113 bits (124), Expect = 5e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||||||||| | || ||||| || || |||||||| || | || ||||| | |||
Sbjct 30844 AGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCT 30785
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | ||||| | ||||| || | ||||| ||||| || ||
Sbjct 30784 TCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCC 30725
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || |||||| ||| | || |||| || || || || | || | ||||
Sbjct 30724 TGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTC 30665
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| || || || || || |||||
Sbjct 30664 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30633
Score = 113 bits (124), Expect = 5e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||||||||| | || ||||| || || |||||||| || | || ||||| | |||
Sbjct 31072 AGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCT 31013
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | ||||| | ||||| || | ||||| ||||| || ||
Sbjct 31012 TCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCC 30953
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || |||||| ||| | || |||| || || || || | || | ||||
Sbjct 30952 TGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTC 30893
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| || || || || || |||||
Sbjct 30892 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30861
Score = 113 bits (124), Expect = 5e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||||||||| | || ||||| || || |||||||| || | || ||||| | |||
Sbjct 31300 AGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCT 31241
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | ||||| | ||||| || | ||||| ||||| || ||
Sbjct 31240 TCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCC 31181
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || |||||| ||| | || |||| || || || || | || | ||||
Sbjct 31180 TGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTC 31121
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| || || || || || |||||
Sbjct 31120 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31089
Score = 113 bits (124), Expect = 5e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||||||||| | || ||||| || || |||||||| || | || ||||| | |||
Sbjct 31528 AGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCT 31469
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | ||||| | ||||| || | ||||| ||||| || ||
Sbjct 31468 TCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCC 31409
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || |||||| ||| | || |||| || || || || | || | ||||
Sbjct 31408 TGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTC 31349
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| || || || || || |||||
Sbjct 31348 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31317
Score = 89.7 bits (98), Expect = 5e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||||||||| | || ||||| || || |||||||| || | || ||||| | |||
Sbjct 30160 AGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCT 30101
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | ||||| | ||||| || | ||||| ||||| || ||
Sbjct 30100 TCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCC 30041
Query 64352 TGTATTTTTTGCTTTAC 64368
|| || || ||||||
Sbjct 30040 TGGATCTTGGCCTTTAC 30024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499608182281720
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