Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq780 89.7 4e-13 >seq780 Length=11850152 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||||| || | | || | ||| ||||| || ||||| || |||||||| || Sbjct 4730954 TGCCACCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTG 4731013 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | | | | ||||| | || |||||||| | |||| ||||| |||||| | Sbjct 4731014 ACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGG 4731073 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||||||||| || ||| || ||| | || || || || || || | Sbjct 4731074 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGA 4731133 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||| || || |||| || || ||||| || ||||| Sbjct 4731134 CCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 4731182 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| ||||| || || || || |||||||| || || | | | | ||||| | || Sbjct 4730751 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTG 4730810 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||||||||| | |||| ||||| ||||| ||||| ||||||||||| || || Sbjct 4730811 CTTGCCAGCGAAGATCAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 4730870 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || || || || || || || || | ||| ||||| || || || Sbjct 4730871 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGT 4730930 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 ||| || || ||||| || ||||| Sbjct 4730931 CAGGGTCTTCACAAAGATCTGCAT 4730954 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| ||||| || || || || |||||||| || || | | | | ||||| | || Sbjct 4731207 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTG 4731266 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 |||||||| | |||| ||||| |||||| ||||| ||||||||||| || || Sbjct 4731267 CTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 4731326 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || || || || || || || || | ||| ||||| || || || Sbjct 4731327 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGT 4731386 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 ||| || || ||||| || ||||| Sbjct 4731387 CAGGGTCTTCACAAAGATCTGCAT 4731410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357366462442955