Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq886 149 9e-31
seq856 109 8e-19
>seq886
Length=3399623
Score = 149 bits (164), Expect = 9e-31
Identities = 178/242 (74%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 9727 ATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGA 9786
|| || | ||| ||||| |||| |||||| ||| |||| || || || || ||||| ||
Sbjct 1177380 ATGAGTCTAGTAGTTTGGAACAGCTGCTCATCATCCCACTCTGGATGCTCCTGTTTCAGG 1177321
Query 9787 ACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGC 9846
| || ||||||| ||||||||| ||||||||||| || || |||||||| || |||||
Sbjct 1177320 ATGTCACAGACCCGGTTGTGTTCCCTCAGCCATATTGTAGCATACATCATCAAGCCCGGG 1177261
Query 9847 ACTAAACCAAACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCA 9906
|| ||||||||||| || | ||| || | ||| ||| | || || || | || |
Sbjct 1177260 ACCAAACCAAACACCTCCTGCCCGACAGAAAACTGCAAGTGTTCAGGTACGTGAGGAGGG 1177201
Query 9907 TACAGCATATGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAATAACC 9966
|| | ||| | |||| || || || || || || ||||||||||| || ||||| | |
Sbjct 1177200 TAGATCATCTCTGCCTGAGTGTCCTTCACTGTTGGTGGATACATTTCTCCATCAATCATC 1177141
Query 9967 TG 9968
||
Sbjct 1177140 TG 1177139
Score = 141 bits (156), Expect = 1e-28
Identities = 211/297 (71%), Gaps = 2/297 (1%)
Strand=Plus/Minus
Query 8880 GGAACGCGGCCAACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGG 8939
|||| || | || || || || ||||| ||| || | ||| ||| | || || |
Sbjct 1179349 GGAAAGCAGTGAAAGGGCAGCCTTTCACGTTGTTGCAGACGAGCTTCTGTAAGGAGGCAG 1179290
Query 8940 TTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGG 8999
| || | || || || || || | ||| ||||||||||| |||||||||||| | ||||
Sbjct 1179289 TATTGATTATTTCGAAGCCCACTTTCCCACCGAAGGTGCTAGGTTTCCAGTACTCAGGGG 1179230
Query 9000 AGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGC 9059
||||||| | || |||| || ||||||| || || || || || | ||| | ||
Sbjct 1179229 AGCAGATAGCATTTCCCATCAGTCCTTTCAGAGAGAATGGTGCTCCGATCTCCACCATTG 1179170
Query 9060 TCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAG-CCAGTGTAGAGTTCG 9118
| ||||||||||||||||| || || || ||||| |||| |||| || | ||| || ||
Sbjct 1179169 TTTCACCGAAGATGGCACCTGGTCGTGGCTTTTCTACGA-GAAGACCTGGGTACAGCTCC 1179111
Query 9119 ACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175
| ||| || | ||| ||||| || |||||| || || || || || || || |||
Sbjct 1179110 ATAGCATCAATGTCTCCATAAAGCTCTTCCAGTTCAGCTGCCATTTCTTTTTCTCCT 1179054
Score = 93.3 bits (102), Expect = 6e-14
Identities = 125/172 (73%), Gaps = 4/172 (2%)
Strand=Plus/Minus
Query 9553 TCAGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGG 9612
||||||| || | |||||| ||||||| |||||||| ||||| || ||||||||||||
Sbjct 1178538 TCAGGCAGAAGCGGGTGCCAGTGGTAGAGAGTATTGAATTCGGCTGCAATTCGGTTCTGG 1178479
Query 9613 TACTGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACC 9670
|| ||||| | ||| |||||| | || || ||||| | || | ||||||||| |
Sbjct 1178478 TATTGAAATCGCTGGT--TGAACAGCAGTTCAGGATCAAACTTGAGTTTGAAGTGGTAGC 1178421
Query 9671 CGCTGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCCGGT 9722
| || | ||||| ||||| | || | ||| || || ||||| || ||
Sbjct 1178420 CACTCAAGTGCTGCACATAGTCCTCAATAACAATCTTGATTGTTTCTCCTGT 1178369
Score = 84.2 bits (92), Expect = 3e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 10389 ACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTATA 10448
|||||| || || | || || ||||||||| | || || || || |||| || ||
Sbjct 1175406 ACCTTTAACACCCATGGGTGTTGGGCAGTCAAGTCCTACTGGTGGAAGGCTTCTTGTGTA 1175347
Query 10449 ATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGCGG 10508
|||||| ||||| ||| | ||||||||||| ||||| | |||||| ||||| ||
Sbjct 1175346 ATAGGAAAGATTGGAATAAGCTTCCCAGCTTTTGTAACTATAATCACTATTGTAAGTTGG 1175287
Query 10509 GGGACTGTCAATCA 10522
|||||||||||||
Sbjct 1175286 TGGACTGTCAATCA 1175273
>seq856
Length=10211694
Score = 109 bits (120), Expect = 8e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 8966 CCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGCCCT 9025
||||| || || ||||||||||||||| | |||||||||||| ||| | | |||||
Sbjct 9654317 CCGCCAAATGTACTGGGTTTCCAGTACTCTGGGGAGCAGATGGGGTTTCCAAGAAGCCCC 9654258
Query 9026 TTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATGGCACCGGGACGC 9085
|||| |||||||||||| || | ||| | ||||| || || || || || ||| |
Sbjct 9654257 TTCAGGGAAAACGGAGCTCCAATCTCCACCATGCTTTCCCCAAAAATACCATTGGGTTGG 9654198
Query 9086 GGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAGGGCT 9145
||||| || | | ||||| | |||| || | ||| || | ||| || || || ||
Sbjct 9654197 GGTTTCTCAAGCAGTAAGCCTGGATAGAACTCCAGAGCATCAATGTCTCCGTACAGCTCT 9654138
Query 9146 TCCAACTCGGCAGCTATCTCCTTCTCACCT 9175
|||| ||| || || |||| | ||| |||
Sbjct 9654137 TCCAGCTCTGCTGCATTCTCTTCCTCTCCT 9654108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723674959784200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |