Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq431 105 1e-17 >seq431 Length=331394 Score = 105 bits (116), Expect = 1e-17 Identities = 116/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || |||||| || | ||||||| | ||||||| |||||| || || || | Sbjct 54913 CCTGCTTCCACCCATAGAAGTGCATGCTGGTGAGTTTGCCGTAGTTGGGTTCTGCAATAT 54972 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | ||||| ||||||||||| ||||| |||||| ||||| | ||||| ||||| |||| Sbjct 54973 GGATGTTGAGAGACTGGCTCTGGTCAATGAAA-GCGCCTCTGTCTGCTGCCATCTTGAGG 55031 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 | || ||||| || ||||||||||| ||||| Sbjct 55032 ACAGTTTTCTGGGATATCTCCCACACTGTCTT 55063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795096925063280