Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq780 149 6e-31
seq515 129 6e-25
seq12 87.8 2e-12
>seq780
Length=11850152
Score = 149 bits (164), Expect = 6e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || || || || || | || ||||| ||||||||| | || |||||| ||
Sbjct 4731641 AACATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCC 4731582
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | || | || |||| ||||| || || |||||| |||||
Sbjct 4731581 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGAC 4731522
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| |||||||| || | || ||||| |||||||| || | ||||||||| ||||||
Sbjct 4731521 CAGCAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTAC 4731462
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGG 38467
|||||||| |||||| | || || ||| | ||||||||| |||||||
Sbjct 4731461 AACATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGTCTGAGAGG 4731415
Score = 145 bits (160), Expect = 8e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | || ||||| ||||||||| | || |||||| |||
Sbjct 4731182 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 4731123
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| || || |||||| |||||||
Sbjct 4731122 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 4731063
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|||||||| || | || ||||| |||||||| || | ||||||||| |||||||||
Sbjct 4731062 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAAC 4731003
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| || ||| | || || ||| | ||||||||| ||||||| |||
Sbjct 4731002 ATCCAGAAAGAATCCACCCTCCATCTTGTGCTGCGTCTGAGAGGTGGC 4730955
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| | || |||||| |||
Sbjct 4730954 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 4730895
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| || || |||||| | |||||
Sbjct 4730894 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 4730835
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|||||||| || | ||| ||||| |||||||| || | ||||||||| |||||||||
Sbjct 4730834 CAGCGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAAC 4730775
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| |||||| | || || ||| | ||||| || |||| || |||
Sbjct 4730774 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGGC 4730727
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| | || |||||| |||
Sbjct 4731410 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 4731351
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| || || |||||| |||||||
Sbjct 4731350 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 4731291
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|||||||| || | || ||||| |||||||| || | ||||||||| |||||||||
Sbjct 4731290 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAAC 4731231
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| |||||| | || || ||| | ||||| || |||| || |||
Sbjct 4731230 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGGC 4731183
>seq515
Length=1665176
Score = 129 bits (142), Expect = 6e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| | || || ||| |||
Sbjct 31545 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 31604
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || |||||| |||| ||
Sbjct 31605 GACACCATTGAGAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCA 31663
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| | ||||| | || ||||| |||||||| || | ||||| ||| ||||||||
Sbjct 31664 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAA 31723
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| |||||| | || |||||| | |||||||| |||| || ||
Sbjct 31724 CATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 31771
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| | || || ||| |||
Sbjct 30177 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 30236
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || |||||| | || ||
Sbjct 30237 GACACCATTGAGAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 30295
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| | ||||| | || ||||| |||||||| || | ||||| ||| ||||||||
Sbjct 30296 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAA 30355
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| |||||| | || |||||| | |||||||| |||| || |||
Sbjct 30356 CATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGGC 30404
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| | || || ||| |||
Sbjct 30405 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 30464
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || |||||| | || ||
Sbjct 30465 GACACCATTGAGAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 30523
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| | ||||| | || ||||| |||||||| || | ||||| ||| ||||||||
Sbjct 30524 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAA 30583
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| |||||| | || |||||| | |||||||| |||| || |||
Sbjct 30584 CATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGGC 30632
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| | || || ||| |||
Sbjct 30633 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 30692
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || |||||| | || ||
Sbjct 30693 GACACCATTGAGAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 30751
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| | ||||| | || ||||| |||||||| || | ||||| ||| ||||||||
Sbjct 30752 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAA 30811
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| |||||| | || |||||| | |||||||| |||| || |||
Sbjct 30812 CATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGGC 30860
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| | || || ||| |||
Sbjct 30861 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 30920
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || |||||| | || ||
Sbjct 30921 GACACCATTGAGAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 30979
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| | ||||| | || ||||| |||||||| || | ||||| ||| ||||||||
Sbjct 30980 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAA 31039
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| |||||| | || |||||| | |||||||| |||| || |||
Sbjct 31040 CATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGGC 31088
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| | || || ||| |||
Sbjct 31089 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 31148
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || |||||| | || ||
Sbjct 31149 GACACCATTGAGAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 31207
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| | ||||| | || ||||| |||||||| || | ||||| ||| ||||||||
Sbjct 31208 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAA 31267
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| |||||| | || |||||| | |||||||| |||| || |||
Sbjct 31268 CATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGGC 31316
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| ||||||||| | || || ||| |||
Sbjct 31317 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 31376
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || |||||| | || ||
Sbjct 31377 GACACCATTGAGAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCA 31435
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| | ||||| | || ||||| |||||||| || | ||||| ||| ||||||||
Sbjct 31436 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAA 31495
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| |||||| | || |||||| | |||||||| |||| || |||
Sbjct 31496 CATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGGC 31544
Score = 98.7 bits (108), Expect = 1e-15
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| ||||| || || |||||| | || || || | ||||| | || |||||
Sbjct 30033 AAGATCCAGGACAAGGAAGGCATTCCCTCTGATCAGCAAAGACTCATCTTTGCTGGCAAG 30092
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447
|||||||| || | ||||| ||| |||||||||||||| |||||| | || ||||||
Sbjct 30093 CAGCTGGAAGATGGACGCACGCTCTCTGACTACAACATCCAGAAGGAATCCACCCTGCAT 30152
Query 38448 TTGGTGCTGCGTTTGAGAGGCGGC 38471
| |||||||| |||| || |||
Sbjct 30153 CTAGTGCTGCGCCTGAGGGGTGGC 30176
>seq12
Length=3827242
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
|||| || ||| ||| ||||| ||| |||||||| || ||||| ||||| | ||| |
Sbjct 3384539 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTTTTCT 3384480
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| ||||||||||| || || || ||||||||||||| ||| || || || || || |
Sbjct 3384479 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 3384420
Query 133037 CCACCA 133042
| ||||
Sbjct 3384419 CAACCA 3384414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500136143585920
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