Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq683 107 8e-18
seq792 100 1e-15
seq2109 87.8 7e-12
>seq683
Length=2443633
Score = 107 bits (118), Expect = 8e-18
Identities = 200/291 (69%), Gaps = 7/291 (2%)
Strand=Plus/Minus
Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379
|||| || || || || || ||||| |||||||| | || || || || || |||||||
Sbjct 557015 ATGCTGTCATCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCTACCAAAGATG 556956
Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439
| || || |||| | ||||| | || ||||| ||||| || ||||||||||||
Sbjct 556955 CTGGCACCATCACTGGCCTTAATGTGATGCGTATTATCAATGAGCCCACAGCAGCTGCTA 556896
Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAA-----ACAGAAGaaaaaaaTATTTTAGTATT 451494
|||| ||||| || ||| || ||| | | | | ||| || ||| || | | ||
Sbjct 556895 TAGCCTATGG-CTTGGACAA-GAAAGGTACCCGGGCTGGAGAGAAGAATGTTCTCATCTT 556838
Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554
||| || ||||| || ||| |||| || | ||| | ||||| ||||| | |||||
Sbjct 556837 TGACTTGGGTGGGGGTACTTTTGATGTGTCCATTCTTACCATTGAGGATGGAATCTTTGA 556778
Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| ||| | || |||||| || || || || || || || |||| ||
Sbjct 556777 GGTGAAGTCCACAGCTGGTGACACCCACCTGGGTGGGGAGGACTTTGACAA 556727
Score = 91.5 bits (100), Expect = 6e-13
Identities = 167/243 (69%), Gaps = 14/243 (6%)
Strand=Plus/Minus
Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT----GTC 451953
|| |||||||| || || || ||||| || || || || || ||| | || | | |
Sbjct 556434 GAGATTGTGCTGGTGGGTGGCTCTACCCGTATCCCCAAGATCCAAAAGCTGCTACAGGAC 556375
Query 451954 TTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATA 452013
||||| | || ||| | || |||||| | || || |||||||||||||| ||
Sbjct 556374 TTCTTCAAT----GGCAAAGAGCTCAACAAGAGCATCAACCCCGATGAAGCTGTTGCTTA 556319
Query 452014 TGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGA 452070
||| ||||| || |||||||||||||| | || ||| | ||| || | ||
Sbjct 556318 TGGCGCTGCTGTGCAAGCAGCTATTCTCATGGG---AGACAAGTCTGAGAATGTGCAGGA 556262
Query 452071 TATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGAT 452130
| | ||| | | ||||| || ||||| || || || |||| || ||||||||| ||||
Sbjct 556261 TCTGCTGCTGTTGGATGTCACCCCTCTGTCCCTGGGCATTGAGACGGCTGGTGGAGTGAT 556202
Query 452131 GAC 452133
|||
Sbjct 556201 GAC 556199
>seq792
Length=3412358
Score = 100 bits (110), Expect = 1e-15
Identities = 111/147 (76%), Gaps = 1/147 (1%)
Strand=Plus/Minus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||||| |||| || | ||||| || |||||||||||||| | || || || || ||
Sbjct 2183391 GTTACTAATGCTGTGGTGACTGTGCCAGCTTATTTCAATGACTCTCAGCGTCAGGCTACA 2183332
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| ||| ||||| || | || || || |||||||| ||||| || |||||
Sbjct 2183331 AAAGATGCTGGAACCATTGCAGGGCTCAACGTGCTGCGAATTATCAATGAGCCGACAGCT 2183272
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAA 451459
||||| |||| ||||| || ||| ||
Sbjct 2183271 GCTGCAATAGCCTATGG-CTTGGACAA 2183246
>seq2109
Length=819
Score = 87.8 bits (96), Expect = 7e-12
Identities = 85/109 (78%), Gaps = 3/109 (3%)
Strand=Plus/Minus
Query 451188 AAAAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTC 451244
|||||| |||||| |||||||||| || | ||||| | || ||||| |||||||
Sbjct 285 AAAAAGCCAAGCCCCATATTCAAGTTGATGTTGGAGGTGGACAGACAAAAACATTTGCTC 226
Query 451245 CTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293
||||||||||||| ||||||| || || || ||||| ||||| || ||
Sbjct 225 CTGAAGAAATTTCTGCTATGGTCCTAACAAAGATGAAGGAAACTGCTGA 177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975569984651204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |