Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq683 131 1e-24
seq553 102 6e-16
seq792 95.1 9e-14
>seq683
Length=2443633
Score = 131 bits (144), Expect = 1e-24
Identities = 900/1438 (63%), Gaps = 24/1438 (2%)
Strand=Plus/Plus
Query 517257 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 517316
||||| | ||||| || ||||| |||||||| | ||||| ||||| ||||| || ||||
Sbjct 555960 CGGCACTGACATTCAGGATACCGTTGGCATCGATGTCAAAAGTGACCTCAATCTGGGGGA 556019
Query 517317 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 517376
| || | | || || || || || || | || | ||||| || || || |
Sbjct 556020 CTCCACGGGGTGCTGGGGGAATGCCCGTTAAGTCGAACTTGCCCAGCAAGTTGTTGTCCT 556079
Query 517377 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGA 517434
|||| | || ||||||||| | | |||| || | ||| | | || || || ||
Sbjct 556080 TAGTCATAGCTCTCTCACCCTCGTACACCTGGACCAGGACACTGC--TCTGGTTGTCCGA 556137
Query 517435 ATAAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATAT 517493
|| || || || |||| ||| ||| ||||| || ||||| | | || | |
Sbjct 556138 GTAGGTGGTGAAGG-TCTGAGTTTGTTTGGTGGGAATAGTGGTGTTGCGCTTGATGAGAG 556196
Query 517494 TGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGA 517553
|||||| | ||||| || || || | || || || ||||| |||||||| | || |
Sbjct 556197 CGGTCATCACTCCACCAGCCGTCTCAATGCCCAGGGACAGAGGGGTGACATCCAACAGCA 556256
Query 517554 CAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 517613
| || || | || ||| | | || | |||||||||||||| | |||||| |
Sbjct 556257 GCAGATCCTGCACATTCTCAGACTTGTCTCCCATGAGAATAGCTGCTTGCACAGCAGCGC 556316
Query 517614 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 517673
|||| |||||||||||||| || || | | | || || | ||| |||||||| || |
Sbjct 556317 CATAAGCAACAGCTTCATCGGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGT 556376
Query 517674 TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 517733
|| || | | | ||| || ||||| | || || || || | ||||| || |
Sbjct 556377 CCTGTAGCAGCTTTTGGATCTTGGGGATACGGGTAGAGCCACCCACCAGCACAATCTCCT 556436
Query 517734 GCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCG 517793
| | ||| || || || || | ||| | | | || || || || || ||
Sbjct 556437 GTATCTGACCCTTGTCAAGCTTGGCATCACGCAGAGCCTTCTCCACAGGCTCCAGGGTGC 556496
Query 517794 CTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA 517852
| | || | || | | || || ||||| || | ||| || || | || ||
Sbjct 556497 CACGGAAAAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGT--GATGGAGGTGTAGAA 556554
Query 517853 -TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911
||||| || ||| | | ||||||| ||||| ||| ||| || ||||| || |
Sbjct 556555 GTCAATGCCCTCGTAGAGGGAATCAATCTCAATGCTAGCTTGTGTGGAAGAGCTGAGGGT 556614
Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTC 517969
|| || || | ||||| ||||| | || | | | || | ||| ||| |
Sbjct 556615 GCGCTTTGCCCTCTCACAAGCTGTACGCAGCCGCCTCACTGC--TCGCTTGTTGCCAGCA 556672
Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTAT 518027
| || ||| | || | |||||| ||||| |||| ||| | || | || || |
Sbjct 556673 ATGTCGCGTTTGTGCTTACGCTTGAATTCTTC--CACAAAATGGTTCACCATGCGGTTGT 556730
Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 518087
|||| || || || |||| | || | || | || | | || | || | |||||
Sbjct 556731 CAAAGTCCTCCCCACCCAGGTGGGTGTCACCAGCTGTGGACTTCACCTCAAAGATTCCAT 556790
Query 518088 CTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147
| |||| | | || | |||||| || || ||||||| ||||| || || ||||
Sbjct 556791 CCTCAATGGTAAGAATGGACACATCAAAAGTACCCCCACCCAAGTCAAAGATGAGAACAT 556850
Query 518148 TCATTTCTTTGTCTTGG------TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201
|| | ||| | || || || || | ||||| || | |||||| || || |
Sbjct 556851 TCTTCTCTCCAGCCCGGGTACCTTTCTTGTCCAAGCCATAGGCTATAGCAGCTGCTGTGG 556910
Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261
| ||||| ||||| | || |||||||| |||| || | || |||||||| || || |
Sbjct 556911 GCTCATTGATAATACGCATCACATTAAGGCCAGTGATGGTGCCAGCATCTTTGGTAGCCT 556970
Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTAC 518321
| | || || || || || || ||||| || || || || |||| |||| |
Sbjct 556971 GGCGCTGGGAGTCATTGAAGTAAGCAGGCACTGTGATGACAGCATTCTGCACTTTGCGCC 557030
Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381
| | ||| || || | | ||||| || | | | ||| || || | ||||
Sbjct 557031 CCAGATAGGCCTCAGCAATCTCCTTCATCTTGGTAAGGACCATGGAGCTGATCTCCTCTG 557090
Query 518382 GGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACAT 518441
|| | | ||| ||| | || |||| | | || || ||| |||
Sbjct 557091 GGAAGAAGGTCTTCATCTCACCCTTGTACTCCACTTGCACCTTGGGCTTGCCACCCTCAT 557150
Query 518442 TAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTC 518501
| | || || ||||||| ||||| || || || || | |||||| | | | |
Sbjct 557151 TCACCACACGGAAGGGCCAGTGCTTCATGTCAGACTGCACTGTGGGGTCATCATACTTGC 557210
Query 518502 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATT 518561
|| || | || || |||||||| || || ||||| || || || || | || | |
Sbjct 557211 GGCCGATGAGGCGCTTGGCATCAAAGATGGTGTTGGTAGGGTTCATAGCCACCTGGTTCT 557270
Query 518562 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 518621
|||| ||||| ||||| || | || || || || || | ||||| || || ||||
Sbjct 557271 TGGCAGCATCACCAATAAGGCGCTCCGTATCAGTGAAGGCCACATAGCTGGGTGTGGTGC 557330
Query 518622 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679
| || || ||||| || || || || || || || |||| || | ||||| |||||
Sbjct 557331 GGTTGCCCTGATCGTTGGCGATGATCTCCACCTTGCCATGCTGGAAGACACCCACACA 557388
>seq553
Length=19410955
Score = 102 bits (112), Expect = 6e-16
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052
||| || || ||| | || ||||| ||||| || |||||| | ||| | | | |||||
Sbjct 1092484 TGTTGTGGCTACAGTGGCGTTTGGAATGGGCATCAATAAAGCAGATATCCGGATGGTTAT 1092425
Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112
||||||||| || || ||| | || ||| ||||||||||||||||| ||||| |||||
Sbjct 1092424 TCATTATGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGGAGAGCTGGTCG 1092365
Query 367113 TGATGG 367118
||||||
Sbjct 1092364 TGATGG 1092359
>seq792
Length=3412358
Score = 95.1 bits (104), Expect = 9e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||||| |||||||||||||| |||||| |||||| || || ||||| || ||||
Sbjct 2184220 CAAAAACTGTATTGGTTGGATTCATTGCAACTTGATTCTTTGCAGCATCGCCGATCAACC 2184279
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
|| || ||||| || | ||| || ||| || || || || || || ||||| ||||
Sbjct 2184280 TCTCGGTATCTGTGAAGGCAACGTAGCTTGGCGTGGTCCGGTTGCCCTGGTCATTGGCAA 2184339
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
| ||||| || || || | || | || || ||||| | | || || || | |||||
Sbjct 2184340 TGATTTCCACCTTCCCGTGCTGGAAGACGCCAACACAGGAATAGGTGGTGCCAAGATCAA 2184399
Query 518703 TACCAATAGC 518712
| |||| |||
Sbjct 2184400 TTCCAACAGC 2184409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780531458627278
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |