Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq792 196 6e-45 seq676 93.3 5e-14 seq2109 87.8 2e-12 >seq792 Length=3412358 Score = 196 bits (216), Expect = 6e-45 Identities = 371/543 (68%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || ||||| || || || || || || || || | || ||||| ||||| || || || Sbjct 2182585 GCACCGTAAGCCACAGCTTCGTCTGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 2182644 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || || || || || ||||| || || || ||||| |||| ||||| Sbjct 2182645 AAATCCTGCAGCAGTTTCTGTATCTTTGGGATACGGGTTGACCCACCAACCAGCACGATG 2182704 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | |||||| |||| || | || || || | ||||| ||||| || | Sbjct 2182705 TCATGAATCTGCGATTTGTCGAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCAAGG 2182764 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| | ||| || ||||| || || | ||||||||| || ||| Sbjct 2182765 GTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGACGTGTAG 2182824 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | |||||||||||||| | | || | | ||||| | Sbjct 2182825 AAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGCGTGCTAGAAGACAGA 2182884 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| ||||| || || || || | ||||||| || | | ||| | Sbjct 2182885 GTACGCTTTGCACGCTCGCATGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTCTCACTG 2182944 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456 || |||||||| || || || || ||||| | ||||| || || | | | | Sbjct 2182945 ATGTCTTTCTTGTGCTTGCGCTTGAACTCAGCGATGAAGTGGTTGACCATGCGGTT---G 2183001 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||||||| || || || ||||| | ||| || |||||||| || Sbjct 2183002 TCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCGGTGGATTTCACCTCAAAGATGCCA 2183061 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | | || |||||||| || ||||| || |||||||| || || || Sbjct 2183062 TCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAGATAAGAACA 2183121 Query 7577 TTC 7579 ||| Sbjct 2183122 TTC 2183124 >seq676 Length=1656847 Score = 93.3 bits (102), Expect = 5e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || || ||||| |||||||| |||||||| | |||||| || |||||||| Sbjct 507874 CCAATGAGCCGCTTCGCATCAAACACTGTGTTCTCGGGGTTGGAGGTAAGCTGGTTCTTG 507933 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || ||||||||||| | || || | ||| ||||| ||||| || || || | Sbjct 507934 GCAGCGTCCCCGATCAAGCGCTCGCCCTCAGGCGTGAACGCCACGTAGGACGGCGTGATA 507993 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || ||||| |||||||| || || ||||| |||||| | || | ||||||| || Sbjct 507994 CGGTTCCCCTGGTCGTTGGCGATGATTTCCACGCGGCCATTCTTGAAGACGCCCAC 508049 >seq2109 Length=819 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || || ||||| |||||||| |||||||| | |||||| || |||||||| Sbjct 650 CCAATGAGCCGCTTCGCATCAAACACTGTGTTCTCGGGGTTGGAGGTAAGCTGGTTCTTG 709 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || ||||||||||| | || || | ||| ||||| ||||| || || || | Sbjct 710 GCAGCGTCCCCGATCAAGCGCTCGCCCTCAGGCGTGAACGCCACGTAGGACGGCGTGATA 769 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGG 8092 || ||||| |||||||| || || ||||| |||||| Sbjct 770 CGGTTCCCCTGGTCGTTGGCGATGATTTCCACGCGG 805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635086252704920