Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq552 96.9 4e-15
seq804 93.3 5e-14
seq711 93.3 5e-14
seq620 89.7 6e-13
seq431 89.7 6e-13
seq123 86.0 7e-12
>seq552
Length=289539
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 67723 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTA 67782
Query 136777 GGGAACAGCTTTT 136789
|| ||| ||||
Sbjct 67783 CGGGCCAGTTTTT 67795
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 75862 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 75920
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
|||||||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 66359 TAGCTCAGCTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 66417
>seq804
Length=4468530
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 2931537 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 2931479
>seq711
Length=4170506
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 359576 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 359634
>seq620
Length=112367
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 56196 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 56138
>seq431
Length=331394
Score = 89.7 bits (98), Expect = 6e-13
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811
|||||||||| | |||||||| || | | || |||||||| | ||| || ||||||||
Sbjct 57335 GTAGATGTTACTGGTGTAGGGCTCAATGGATTCGTTGTTGCCCAAGATCTGAGCAGTGGA 57394
Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853
||| || |||||||||| | |||||| ||||||| || |||
Sbjct 57395 AGCAGTTGGCATGGGAGAAAGGAGAAGGCTGTTTCTGACACC 57436
Score = 89.7 bits (98), Expect = 6e-13
Identities = 103/136 (76%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 110316 CTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACC 110375
||| |||||| ||| || |||| ||||| ||||||| ||| | || ||| ||
Sbjct 62395 CTCATCTTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCC 62454
Query 110376 CAAGTTCTTCTGATT-CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTAC 110434
|||||||| |||||| | ||| | |||||| | || || |||||||||||||| || |
Sbjct 62455 CAAGTTCTGCTGATTGCTCTTTCG-GTTGCAAGAGTCTTTGTAGAGCATGTATGGTGTGC 62513
Query 110435 CAGTTTCCGTCTGTGA 110450
|||| |||||||||||
Sbjct 62514 CAGTCTCCGTCTGTGA 62529
>seq123
Length=3649919
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 119207 ATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCAT 119266
||| ||||| || ||||| || |||||||| ||||| || || || ||||||||||||||
Sbjct 2430981 ATATTCACCTACTCTCTTCTCAAAGAAATTGGTCTTGCCTTCCAGAGAGATGTTTTCCAT 2430922
Query 119267 AAAGTCAAAAGGATT 119281
||||||||||||||
Sbjct 2430921 GAAGTCAAAAGGATT 2430907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588932835421400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |