Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq515 113 3e-20
seq780 105 4e-18
>seq515
Length=1665176
Score = 113 bits (124), Expect = 3e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811
|| || ||||||| | || || | || | ||| ||| ||||| ||||| |||||
Sbjct 31774 TTACCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCA 31715
Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871
|| || | ||| |||| |||||||| || || ||||| || |||| |||||| || |
Sbjct 31714 GAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCGGGG 31655
Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCA 34931
|| | || |||||||| ||||| || ||| | || | |||| || ||||
Sbjct 31654 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCA 31595
Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || | ||| ||||| || || || || ||||||||||||||||||||
Sbjct 31594 ACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31545
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || || | ||| |||| |||||||| || || |||||
Sbjct 30368 TTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 30309
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| |||| |||||| || || | || |||||||| ||||| || |||
Sbjct 30308 GATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTT 30249
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | |||| || |||||| || | ||| ||||| || || || || ||||||||
Sbjct 30248 CTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 30189
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 30188 AAAGATCTGCAT 30177
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || || | ||| |||| |||||||| || || |||||
Sbjct 30596 TTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 30537
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| |||| |||||| || || | || |||||||| ||||| || |||
Sbjct 30536 GATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTT 30477
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | |||| || |||||| || | ||| ||||| || || || || ||||||||
Sbjct 30476 CTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 30417
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 30416 AAAGATCTGCAT 30405
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || || | ||| |||| |||||||| || || |||||
Sbjct 30824 TTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 30765
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| |||| |||||| || || | || |||||||| ||||| || |||
Sbjct 30764 GATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTT 30705
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | |||| || |||||| || | ||| ||||| || || || || ||||||||
Sbjct 30704 CTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 30645
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 30644 AAAGATCTGCAT 30633
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || || | ||| |||| |||||||| || || |||||
Sbjct 31052 TTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 30993
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| |||| |||||| || || | || |||||||| ||||| || |||
Sbjct 30992 GATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTT 30933
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | |||| || |||||| || | ||| ||||| || || || || ||||||||
Sbjct 30932 CTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 30873
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 30872 AAAGATCTGCAT 30861
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || || | ||| |||| |||||||| || || |||||
Sbjct 31280 TTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 31221
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| |||| |||||| || || | || |||||||| ||||| || |||
Sbjct 31220 GATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTT 31161
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | |||| || |||||| || | ||| ||||| || || || || ||||||||
Sbjct 31160 CTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 31101
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 31100 AAAGATCTGCAT 31089
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || || | ||| |||| |||||||| || || |||||
Sbjct 31508 TTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 31449
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| |||| |||||| || || | || |||||||| ||||| || |||
Sbjct 31448 GATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTT 31389
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | |||| || |||||| || | ||| ||||| || || || || ||||||||
Sbjct 31388 CTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 31329
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 31328 AAAGATCTGCAT 31317
>seq780
Length=11850152
Score = 105 bits (116), Expect = 4e-18
Identities = 141/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||||||||| ||||| ||||| || ||| | || |||| |||||||| || || |||||
Sbjct 4730991 TTCTTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 4731050
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || |||||||| | || | || |||||||| ||||| || || |
Sbjct 4731051 GATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--A 4731108
Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967
| || || | |||| || ||| || || | ||| ||||| || || || | ||||||
Sbjct 4731109 TTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTC 4731168
Query 34968 ACAAAGATCTGCAT 34981
||||||||||||||
Sbjct 4731169 ACAAAGATCTGCAT 4731182
Score = 105 bits (116), Expect = 4e-18
Identities = 141/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || ||| | || |||| |||||||| || || |||||
Sbjct 4731219 TTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 4731278
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || |||||||| | || | || |||||||| ||||| || || |
Sbjct 4731279 GATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--A 4731336
Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967
| || || | |||| || ||| || || | ||| ||||| || || || || ||||||
Sbjct 4731337 TTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 4731396
Query 34968 ACAAAGATCTGCAT 34981
||||||||||||||
Sbjct 4731397 ACAAAGATCTGCAT 4731410
Score = 102 bits (112), Expect = 5e-17
Identities = 140/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || ||| | || |||| |||||||| || || || ||
Sbjct 4730763 TTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAA 4730822
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || |||||||| | || | || |||||||| ||||| || || |
Sbjct 4730823 GATCAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--A 4730880
Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967
| || || | |||| || ||| || || | ||| ||||| || || || || ||||||
Sbjct 4730881 TTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 4730940
Query 34968 ACAAAGATCTGCAT 34981
||||||||||||||
Sbjct 4730941 ACAAAGATCTGCAT 4730954
Score = 102 bits (112), Expect = 5e-17
Identities = 142/197 (72%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| || ||| | || |||| |||||||| || || |||||
Sbjct 4731447 TTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 4731506
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || |||||||| | || | || |||||||| ||||| || || |
Sbjct 4731507 GATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--A 4731564
Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967
| || || | |||| || ||| || || | ||| ||||| || || || | ||||||
Sbjct 4731565 TTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTC 4731624
Query 34968 ACAAAGATCTGCATATT 34984
|||||||||||||| ||
Sbjct 4731625 ACAAAGATCTGCATGTT 4731641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324610403204664
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