Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq792 118 9e-21
seq683 111 1e-18
seq515 86.0 5e-11
>seq792
Length=3412358
Score = 118 bits (130), Expect = 9e-21
Identities = 112/142 (79%), Gaps = 1/142 (1%)
Strand=Plus/Minus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| |||| || | ||||| ||||| ||||| |||||||| || ||||| |||||
Sbjct 2183391 GTTACTAATGCTGTGGTGACTGTGCCAGCTTATTTCAATGACTCTCAGCGTCAGGCTACA 2183332
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|||||||||||| ||||| || || || || || || ||||||||||| || || |||
Sbjct 2183331 AAAGATGCTGGAACCATTGCAGGGCTCAACGTGCTGCGAATTATCAATGAGCCGACAGCT 2183272
Query 550511 GCTGCACTTGCATATGGACTTG 550532
|||||| | || ||||| ||||
Sbjct 2183271 GCTGCAATAGCCTATGG-CTTG 2183251
>seq683
Length=2443633
Score = 111 bits (122), Expect = 1e-18
Identities = 354/546 (65%), Gaps = 11/546 (2%)
Strand=Plus/Minus
Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051
|| || || || || || || ||||| || ||||| ||||| | || |||| ||
Sbjct 557421 GCAATCGGCATCGACTTGGGCACCACGTACTCCTGTGTGGGTGTCTTCCAGCATGGCAAG 557362
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
|| || || || ||||| ||||| || ||| | || || || ||||| | |||||
Sbjct 557361 GTGGAGATCATCGCCAACGATCAGGGCAACCGCACCACACCCAGCTATGTGGCCTTCACT 557302
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| || || | | |||||||||| || || | || | || || ||||||||
Sbjct 557301 GATACGGAGCGCCTTATTGGTGATGCTGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 557242
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
|| || |||||||| || || | || || | | | | |||| | || || ||| |
Sbjct 557241 ACCATCTTTGATGCCAAGCGCCTCATCGGCCGCAAGTATGATGACCCCACAGTGCAGTCT 557182
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC- 550290
|| |||||||| ||||| |||| | || |||| ||| || || | | |||
Sbjct 557181 GACATGAAGCACTGGCCCTTCCGTGTGGTGAATGAGGGTGGCAAGCCCAAGGTGCAAGTG 557122
Query 550291 ---TACTCATGAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTTT 550346
||| |||| | | | || | || | ||||| | || || |||||
Sbjct 557121 GAGTAC-----AAGGGTGAGATGAAGACCTTCTTCCCAGAGGAGATCAGCTCCATGGTCC 557067
Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406
| | || ||||| | | || || | | | || | |||| | |||| || |
Sbjct 557066 TTACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGGCGCAAAGTGCAGAATGCTGTCA 557007
Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466
| || || || || || || |||||||| || || || ||||| ||||||||||| |
Sbjct 557006 TCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCTACCAAAGATGCTGGCACCA 556947
Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526
| |||| |||||||| | |||||||||||||| || || || ||||| | || ||||
Sbjct 556946 TCACTGGCCTTAATGTGATGCGTATTATCAATGAGCCCACAGCAGCTGCTATAGCCTATG 556887
Query 550527 GACTTG 550532
| ||||
Sbjct 556886 G-CTTG 556882
>seq515
Length=1665176
Score = 86.0 bits (94), Expect = 5e-11
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
||| || || || || ||||| ||||| ||| || || ||||| |||| || ||
Sbjct 30398 CCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGT 30339
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| | |||||| || || || || ||||| || |||||||||||||||| ||||| ||
Sbjct 30338 GCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCC 30279
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432
||| || || || || || ||||| |||||| || ||| || | | || |
Sbjct 30278 TTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAA 30219
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || ||||| || || || || || || |||||
Sbjct 30218 GGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30177
Score = 86.0 bits (94), Expect = 5e-11
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
||| || || || || ||||| ||||| ||| || || ||||| |||| || ||
Sbjct 30626 CCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGT 30567
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| | |||||| || || || || ||||| || |||||||||||||||| ||||| ||
Sbjct 30566 GCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCC 30507
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432
||| || || || || || ||||| |||||| || ||| || | | || |
Sbjct 30506 TTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAA 30447
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || ||||| || || || || || || |||||
Sbjct 30446 GGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30405
Score = 86.0 bits (94), Expect = 5e-11
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
||| || || || || ||||| ||||| ||| || || ||||| |||| || ||
Sbjct 30854 CCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGT 30795
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| | |||||| || || || || ||||| || |||||||||||||||| ||||| ||
Sbjct 30794 GCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCC 30735
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432
||| || || || || || ||||| |||||| || ||| || | | || |
Sbjct 30734 TTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAA 30675
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || ||||| || || || || || || |||||
Sbjct 30674 GGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30633
Score = 86.0 bits (94), Expect = 5e-11
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
||| || || || || ||||| ||||| ||| || || ||||| |||| || ||
Sbjct 31082 CCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGT 31023
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| | |||||| || || || || ||||| || |||||||||||||||| ||||| ||
Sbjct 31022 GCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCC 30963
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432
||| || || || || || ||||| |||||| || ||| || | | || |
Sbjct 30962 TTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAA 30903
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || ||||| || || || || || || |||||
Sbjct 30902 GGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30861
Score = 86.0 bits (94), Expect = 5e-11
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
||| || || || || ||||| ||||| ||| || || ||||| |||| || ||
Sbjct 31310 CCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGT 31251
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| | |||||| || || || || ||||| || |||||||||||||||| ||||| ||
Sbjct 31250 GCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCC 31191
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432
||| || || || || || ||||| |||||| || ||| || | | || |
Sbjct 31190 TTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAA 31131
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || ||||| || || || || || || |||||
Sbjct 31130 GGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31089
Score = 86.0 bits (94), Expect = 5e-11
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
||| || || || || ||||| ||||| ||| || || ||||| |||| || ||
Sbjct 31538 CCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGT 31479
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| | |||||| || || || || ||||| || |||||||||||||||| ||||| ||
Sbjct 31478 GCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGAATGCC 31419
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432
||| || || || || || ||||| |||||| || ||| || | | || |
Sbjct 31418 TTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAA 31359
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || ||||| || || || || || || |||||
Sbjct 31358 GGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31317
Score = 86.0 bits (94), Expect = 5e-11
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
||| || || || || ||||| ||||| ||| || || ||||| |||| || ||
Sbjct 31766 CCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGT 31707
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| | |||||| || || || || ||||| || |||||||||||||| || ||||| ||
Sbjct 31706 GCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCGGGGGGAATGCC 31647
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432
||| || || || || || ||||| |||||| || ||| || | | || |
Sbjct 31646 TTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAA 31587
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || ||||| || || || || || || |||||
Sbjct 31586 GGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028985938117870
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