Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq123 136 5e-27
seq12 98.7 1e-15
>seq123
Length=3649919
Score = 136 bits (150), Expect = 5e-27
Identities = 107/128 (84%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259
||||||||||| || | |||||| ||||| || | ||| |||||||| |||||||| ||
Sbjct 2429723 TCATCTCTACTGATTAGTTCATTTGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 2429664
Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319
| |||||| |||| ||||||||| ||||||||||| || ||||| ||||||||||| |||
Sbjct 2429663 AGCCAAAAAATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 2429604
Query 37320 ACAAGACG 37327
|| | |||
Sbjct 2429603 ACTACACG 2429596
Score = 86.0 bits (94), Expect = 7e-12
Identities = 77/94 (82%), Gaps = 2/94 (2%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930
||||||||||||| | |||||||| || |||| |||| || || ||||| ||||| ||||
Sbjct 2430999 CATAACTCCCATTCTCTGATATTCACCTACTC-TCTTCTCAAAGAAATTGGTCTTGCCTT 2430941
Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964
| || || || |||||||| || ||||| |||||
Sbjct 2430940 CCAGAGAGATGTTTTCCATGAAGTCAAAAGGATT 2430907
>seq12
Length=3827242
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259
|||||||| || || | |||||| || || || | ||| ||||| | || ||||| ||
Sbjct 3384537 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTTTTCTTC 3384478
Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319
| ||||||||| || ||||| || || |||||||| || ||||||||||| ||||| ||
Sbjct 3384477 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 3384418
Query 37320 AC 37321
||
Sbjct 3384417 AC 3384416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592273390582520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |