Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq977 104 2e-17
seq933 91.5 1e-13
>seq977
Length=740791
Score = 104 bits (114), Expect = 2e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
||| || |||| |||||||| || ||||||||||||||||| || || ||||||| ||
Sbjct 265038 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAACCCATAAACTGGTCCCAAATC 265097
Query 30210 TCCCTCTTCCCT-GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268
||||| || || ||||| || || ||| |||| || || | || || || || |
Sbjct 265098 CCCCTCCTCTCTGGTGCT-AAAACCTTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 265156
Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317
|||| ||||| || || || | ||||||||||||| ||||| || ||
Sbjct 265157 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC 265205
>seq933
Length=2485477
Score = 91.5 bits (100), Expect = 1e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161
|| |||||||||||||| || | || || |||||| | | ||| | |||||| || ||
Sbjct 1595227 TTGAGCTCCCTGCTGAGCACGATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 1595168
Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
||||||||||| || ||||||||||| ||||| | ||||| || |||
Sbjct 1595167 ATGGAGAACCAGGTTTTTCTACCCATGATCACTGCATTCTGTTTACCT 1595120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408588402101699
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |