Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq576 212 7e-50
seq470 158 1e-33
>seq576
Length=3428205
Score = 212 bits (234), Expect = 7e-50
Identities = 646/993 (65%), Gaps = 13/993 (1%)
Strand=Plus/Plus
Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104
||||||||| | || |||| |||| || || || |||||| || || || |
Sbjct 1682908 TGTGTCGCAAGTACTCTTCCAAGCATTTCACTGCAAAAGGGTCAACATCAGTATCAAACT 1682967
Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164
|||| || || | ||||| |||| ||| | ||||| || ||||| ||| || |
Sbjct 1682968 TATTAGCAAAGAAGTGGTGGT--TTCT-TAGCACCCAGTTCAGATCTCCTACCCCAAAAA 1683024
Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224
| ||||| || || | ||| || || ||||| || ||||| | || ||||| | | ||
Sbjct 1683025 CACAGACAGAGCGAACGTGAACTCCATTGCATGGTGGGTAAGGTGCACCTTTGGATATGT 1683084
Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284
||||||| ||||||||||||| ||||||||||| | || | |||||| || || |
Sbjct 1683085 CACCTTCAAAGTACTGCCACTTGACAAACCTGGCCAGTGCATTCATGTCAGAAACATCAT 1683144
Query 160285 ATTTGTACATCAGGGGAA-CGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343
| |||| || || ||| | ||||| || || | || || | ||| | || ||||||
Sbjct 1683145 ACTTGT-CACTAGAAGAAACTGCACCTGGGACTTCAGGGATTCTCTGAATTGTTGCCCAC 1683203
Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403
|||| || || |||||||| || || || | ||| || ||||||| ||| |||
Sbjct 1683204 AGGTACTCATCTGGGCTGTAAGTATCTTTTGCCCACTCTATGAACTTAAGTATTTTGCTG 1683263
Query 160404 TCCCGCAGAACGTG----AGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGA 160459
| || || | ||| | |||| | || ||||| || || || || ||
Sbjct 1683264 CTTTTTAATACATGTTCTATAAACCT----TCTGCTAACTACAAAATAGGCACTACCAGA 1683319
Query 160460 GAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCC 160519
|| || || | | ||| ||| | |||||| || ||||| | ||
Sbjct 1683320 AAAAATTGGAGTACTGAGAGGTGGCAGCTGTTTGTCTATGCCTGTGTTCTTTATTTTACC 1683379
Query 160520 TTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGT 160579
| | | | | || | || |||||||| || || | ||||| ||| ||
Sbjct 1683380 ATGAATAATCTCATGGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCATTTTTTCTGT 1683439
Query 160580 CTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTT 160639
|| | ||||| |||| | || | ||| | | || || || || |||| |||||
Sbjct 1683440 TTCCAAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTT 1683499
Query 160640 GAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTG 160699
| |||||||| |||| || | |||||| | ||| ||||| || | || ||
Sbjct 1683500 TATAGGAAAGTCCATACCACAAAGGTTTATTAGGTATTTCCAGTTTGAACTTTTCCTGTA 1683559
Query 160700 CAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTT 160759
|| || ||||||| ||||| ||||||||||| | |||||| ||||| ||||| || |
Sbjct 1683560 GAGATCTTTCATGCAGTTAATGTCTGCCTGCACCCTGCTCCATGAAGCATACACAACACT 1683619
Query 160760 CTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAG 160819
||||| | |||| | |||||| || || ||||| || || || ||| ||| ||
Sbjct 1683620 CTCTAACTGGCTGGAAATAAAGACATTCTCAAAACATGAGACTATGCCCTTCACAGCAGC 1683679
Query 160820 AAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTA 160879
||| || || | |||| ||| || || | ||| || | |||||||| || ||
Sbjct 1683680 AAAAAAAGACTCTGGAGACTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATA 1683739
Query 160880 GATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGC 160939
||| | || || | || || | |||||| || || |||| | ||| || ||||| ||
Sbjct 1683740 GATTGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTAAGC 1683799
Query 160940 TATCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGAT 160999
|| ||||| || | || || || || | | | | |||||| || |||||| |
Sbjct 1683800 AATTGGAAATTCTGCTTCTTCATTGCTGAGAGGTTCCATAATGTACTTCCGAGTCTTGGT 1683859
Query 161000 AAAATAATCACAATCCCGCGTCATGTTGATATA 161032
||| | |||| || |||||||| |||||
Sbjct 1683860 GAAAGAGGCACAGTCTGCTGTCATGTTAATATA 1683892
>seq470
Length=2661214
Score = 158 bits (174), Expect = 1e-33
Identities = 603/934 (65%), Gaps = 22/934 (2%)
Strand=Plus/Minus
Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103
||||| ||||| || || || ||||| || |||| |||| || ||||||
Sbjct 391410 CTGTGGCGCAGGTGCTCCTCGAGACACATGATGGCGGCATCGTCCACCATGGGGTCGAAC 391351
Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163
|| || || || || ||||| | |||||| | |||| |||||| || |||| |
Sbjct 391350 TTGTTGGCCAAGAGGTGGTGC---TGCTGTAGCACCCAGGACACGTCGCCCACCCCGTAG 391294
Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223
|| ||||||| || |||| |||| |||| |||||||| | || || || |
Sbjct 391293 ACACAGACGGCGCGCTGGTGCTGGCCGGTGCAGGGCGGGTAGGGTGCACCCTTGCTGGTG 391234
Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283
||||| || |||||||||||| || | | || | || | |||||| ||| | |
Sbjct 391233 TCACCCTCTAGGTACTGCCACTTGACCAGGCGGGGCAGGGCATTCATGTCCGAGAGCTGG 391174
Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343
|| |||| || |||| | ||| ||||| ||||||||||| || | |||||||||||
Sbjct 391173 TACTTGTCGCTCTGGGGCATGGCGCCGGGCACGCCGGGCATGCGGTTGAGGGTGGCCCAG 391114
Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT-CTCCGATTAACCT 160402
| || || || |||||||| |||||||| | ||| || | ||||| || | |
Sbjct 391113 ACATGCTCATCAGGGCTGTAGGTGTCCTTGGCCCACTCGAGGAACTGCTGAGCTGTGGGG 391054
Query 160403 GTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAA 160462
|| || || | ||| ||| ||| | ||| || |||| ||| || |||| | |||
Sbjct 391053 TTCTCGAAG-ATGTGCTGCACGAAGGCCCGGGTAACCACAATGTATGCATTGCCTGTGAA 390995
Query 160463 TAT-CGGTATGGGTATAGGCGGCGTGTCTTTGTC-CTGACCG-GTGTTAGACACCACTCC 160519
|| |||| || ||||||| ||| || ||| | | || ||| |
Sbjct 390994 CATGGGGTAGTTGT-GCGGCGGCGGCAGTTTCTCTCTGGCAGTCCGTGAGATA-----AA 390941
Query 160520 TTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGT-TCCG 160578
| || ||| |||| | | || ||| | | |||| | ||| | || | || |
Sbjct 390940 TGTCCCCACTTCGTGGTGGTACTGCCAGCGCTGCCGCTTGAGGGGT-GAGGGCTTCTCTG 390882
Query 160579 TCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCT 160638
||| | ||||| || | ||| ||||| || |||||| ||| ||||
Sbjct 390881 ACTCCATGCTGTTCCGCCCCTGCAGCACCTTCAGGGCACGGATGATCTCGGCGTTGGTCT 390822
Query 160639 TGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCG---CTCAGGT 160695
||| || ||||| || ||||| ||| | ||||| |||| | || ||| |
Sbjct 390821 TGATGGGGAAGTCTGTGCCGCAGGTGTTGAGGACGTAGCGCCATGGCACGGGACTCCG-- 390764
Query 160696 CGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTA 160755
||||||| |||||| || | || || |||| ||| |||||| || || || |
Sbjct 390763 -CAACAGGTCCTGCATGCAGTTGAGGTCAGCTTGCAGCCGGGACCAGGAGGCATAGACCA 390705
Query 160756 CGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCG 160815
| || || || | || ||||||||||| || ||| || | |||||| || || |
Sbjct 390704 CATTTTCCAGGTGGCTAGCCACAAAGACATTGGGGAAGCAGGCCACGATGGCCTGTACAG 390645
Query 160816 CCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCG 160875
|| ||| | | ||| | ||| | ||| ||||| || | |||||| || |
Sbjct 390644 CCTCCTTGAAAGTGGCCGGAGACTTGCTGTCAATGTGGACGCAGTAGATGTTCTGGGGGG 390585
Query 160876 CGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGT 160935
| |||| || || || | || |||||||||||| || || | ||||| || || ||||
Sbjct 390584 CATAGAGGGACCGCAGGAGCCGCTCGAACATCTCGATTTTGTTGTGGATGACCATGGAGT 390525
Query 160936 AGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969
|||| || || ||||| |||||| | |||||
Sbjct 390524 AGGCGATGGGGAACTCCACCTCCTCCTGGCTCAG 390491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577176897047880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |