Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq576 212 7e-50 seq470 158 1e-33 >seq576 Length=3428205 Score = 212 bits (234), Expect = 7e-50 Identities = 646/993 (65%), Gaps = 13/993 (1%) Strand=Plus/Plus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||||||||| | || |||| |||| || || || |||||| || || || | Sbjct 1682908 TGTGTCGCAAGTACTCTTCCAAGCATTTCACTGCAAAAGGGTCAACATCAGTATCAAACT 1682967 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| |||| ||| | ||||| || ||||| ||| || | Sbjct 1682968 TATTAGCAAAGAAGTGGTGGT--TTCT-TAGCACCCAGTTCAGATCTCCTACCCCAAAAA 1683024 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || | ||| || || ||||| || ||||| | || ||||| | | || Sbjct 1683025 CACAGACAGAGCGAACGTGAACTCCATTGCATGGTGGGTAAGGTGCACCTTTGGATATGT 1683084 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 ||||||| ||||||||||||| ||||||||||| | || | |||||| || || | Sbjct 1683085 CACCTTCAAAGTACTGCCACTTGACAAACCTGGCCAGTGCATTCATGTCAGAAACATCAT 1683144 Query 160285 ATTTGTACATCAGGGGAA-CGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || || ||| | ||||| || || | || || | ||| | || |||||| Sbjct 1683145 ACTTGT-CACTAGAAGAAACTGCACCTGGGACTTCAGGGATTCTCTGAATTGTTGCCCAC 1683203 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 |||| || || |||||||| || || || | ||| || ||||||| ||| ||| Sbjct 1683204 AGGTACTCATCTGGGCTGTAAGTATCTTTTGCCCACTCTATGAACTTAAGTATTTTGCTG 1683263 Query 160404 TCCCGCAGAACGTG----AGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGA 160459 | || || | ||| | |||| | || ||||| || || || || || Sbjct 1683264 CTTTTTAATACATGTTCTATAAACCT----TCTGCTAACTACAAAATAGGCACTACCAGA 1683319 Query 160460 GAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCC 160519 || || || | | ||| ||| | |||||| || ||||| | || Sbjct 1683320 AAAAATTGGAGTACTGAGAGGTGGCAGCTGTTTGTCTATGCCTGTGTTCTTTATTTTACC 1683379 Query 160520 TTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGT 160579 | | | | | || | || |||||||| || || | ||||| ||| || Sbjct 1683380 ATGAATAATCTCATGGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCATTTTTTCTGT 1683439 Query 160580 CTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTT 160639 || | ||||| |||| | || | ||| | | || || || || |||| ||||| Sbjct 1683440 TTCCAAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTT 1683499 Query 160640 GAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTG 160699 | |||||||| |||| || | |||||| | ||| ||||| || | || || Sbjct 1683500 TATAGGAAAGTCCATACCACAAAGGTTTATTAGGTATTTCCAGTTTGAACTTTTCCTGTA 1683559 Query 160700 CAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTT 160759 || || ||||||| ||||| ||||||||||| | |||||| ||||| ||||| || | Sbjct 1683560 GAGATCTTTCATGCAGTTAATGTCTGCCTGCACCCTGCTCCATGAAGCATACACAACACT 1683619 Query 160760 CTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAG 160819 ||||| | |||| | |||||| || || ||||| || || || ||| ||| || Sbjct 1683620 CTCTAACTGGCTGGAAATAAAGACATTCTCAAAACATGAGACTATGCCCTTCACAGCAGC 1683679 Query 160820 AAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTA 160879 ||| || || | |||| ||| || || | ||| || | |||||||| || || Sbjct 1683680 AAAAAAAGACTCTGGAGACTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATA 1683739 Query 160880 GATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGC 160939 ||| | || || | || || | |||||| || || |||| | ||| || ||||| || Sbjct 1683740 GATTGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTAAGC 1683799 Query 160940 TATCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGAT 160999 || ||||| || | || || || || | | | | |||||| || |||||| | Sbjct 1683800 AATTGGAAATTCTGCTTCTTCATTGCTGAGAGGTTCCATAATGTACTTCCGAGTCTTGGT 1683859 Query 161000 AAAATAATCACAATCCCGCGTCATGTTGATATA 161032 ||| | |||| || |||||||| ||||| Sbjct 1683860 GAAAGAGGCACAGTCTGCTGTCATGTTAATATA 1683892 >seq470 Length=2661214 Score = 158 bits (174), Expect = 1e-33 Identities = 603/934 (65%), Gaps = 22/934 (2%) Strand=Plus/Minus Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103 ||||| ||||| || || || ||||| || |||| |||| || |||||| Sbjct 391410 CTGTGGCGCAGGTGCTCCTCGAGACACATGATGGCGGCATCGTCCACCATGGGGTCGAAC 391351 Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163 || || || || || ||||| | |||||| | |||| |||||| || |||| | Sbjct 391350 TTGTTGGCCAAGAGGTGGTGC---TGCTGTAGCACCCAGGACACGTCGCCCACCCCGTAG 391294 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 || ||||||| || |||| |||| |||| |||||||| | || || || | Sbjct 391293 ACACAGACGGCGCGCTGGTGCTGGCCGGTGCAGGGCGGGTAGGGTGCACCCTTGCTGGTG 391234 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283 ||||| || |||||||||||| || | | || | || | |||||| ||| | | Sbjct 391233 TCACCCTCTAGGTACTGCCACTTGACCAGGCGGGGCAGGGCATTCATGTCCGAGAGCTGG 391174 Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 || |||| || |||| | ||| ||||| ||||||||||| || | ||||||||||| Sbjct 391173 TACTTGTCGCTCTGGGGCATGGCGCCGGGCACGCCGGGCATGCGGTTGAGGGTGGCCCAG 391114 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT-CTCCGATTAACCT 160402 | || || || |||||||| |||||||| | ||| || | ||||| || | | Sbjct 391113 ACATGCTCATCAGGGCTGTAGGTGTCCTTGGCCCACTCGAGGAACTGCTGAGCTGTGGGG 391054 Query 160403 GTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAA 160462 || || || | ||| ||| ||| | ||| || |||| ||| || |||| | ||| Sbjct 391053 TTCTCGAAG-ATGTGCTGCACGAAGGCCCGGGTAACCACAATGTATGCATTGCCTGTGAA 390995 Query 160463 TAT-CGGTATGGGTATAGGCGGCGTGTCTTTGTC-CTGACCG-GTGTTAGACACCACTCC 160519 || |||| || ||||||| ||| || ||| | | || ||| | Sbjct 390994 CATGGGGTAGTTGT-GCGGCGGCGGCAGTTTCTCTCTGGCAGTCCGTGAGATA-----AA 390941 Query 160520 TTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGT-TCCG 160578 | || ||| |||| | | || ||| | | |||| | ||| | || | || | Sbjct 390940 TGTCCCCACTTCGTGGTGGTACTGCCAGCGCTGCCGCTTGAGGGGT-GAGGGCTTCTCTG 390882 Query 160579 TCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCT 160638 ||| | ||||| || | ||| ||||| || |||||| ||| |||| Sbjct 390881 ACTCCATGCTGTTCCGCCCCTGCAGCACCTTCAGGGCACGGATGATCTCGGCGTTGGTCT 390822 Query 160639 TGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCG---CTCAGGT 160695 ||| || ||||| || ||||| ||| | ||||| |||| | || ||| | Sbjct 390821 TGATGGGGAAGTCTGTGCCGCAGGTGTTGAGGACGTAGCGCCATGGCACGGGACTCCG-- 390764 Query 160696 CGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTA 160755 ||||||| |||||| || | || || |||| ||| |||||| || || || | Sbjct 390763 -CAACAGGTCCTGCATGCAGTTGAGGTCAGCTTGCAGCCGGGACCAGGAGGCATAGACCA 390705 Query 160756 CGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCG 160815 | || || || | || ||||||||||| || ||| || | |||||| || || | Sbjct 390704 CATTTTCCAGGTGGCTAGCCACAAAGACATTGGGGAAGCAGGCCACGATGGCCTGTACAG 390645 Query 160816 CCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCG 160875 || ||| | | ||| | ||| | ||| ||||| || | |||||| || | Sbjct 390644 CCTCCTTGAAAGTGGCCGGAGACTTGCTGTCAATGTGGACGCAGTAGATGTTCTGGGGGG 390585 Query 160876 CGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGT 160935 | |||| || || || | || |||||||||||| || || | ||||| || || |||| Sbjct 390584 CATAGAGGGACCGCAGGAGCCGCTCGAACATCTCGATTTTGTTGTGGATGACCATGGAGT 390525 Query 160936 AGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969 |||| || || ||||| |||||| | ||||| Sbjct 390524 AGGCGATGGGGAACTCCACCTCCTCCTGGCTCAG 390491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577176897047880