Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq449 87.8 5e-12 >seq449 Length=239789 Score = 87.8 bits (96), Expect = 5e-12 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 302650 CGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCT 302708 || |||||||| || |||||||| | |||| || ||| || || | | | ||| | Sbjct 167855 CGCCCACCCATGGCGTGGAAGAAGAACTCTGTGGG-CGTCAGGCCGGCCAGGTACGAGTT 167913 Query 302709 CTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCT 302768 ||| ||||| || || |||||| || |||| |||| | ||||| ||||| |||| Sbjct 167914 CTCCACGAAGCCCCGGCTCTCGGGGCCATAGTCGTCCTTGATGAAGTGGGGCAGCGTCCG 167973 Query 302769 GTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCA 302818 || || |||| | ||||| ||||| || || |||||||||||||||| Sbjct 167974 GTGCTTGAAGCCAAAGGGGATGCGCTTGCCCTCCACGTTCTGCTGTCCCA 168023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471707037521831