Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq827 179 5e-39 seq627 132 6e-25 seq986 125 9e-23 >seq827 Length=3065556 Score = 179 bits (198), Expect = 5e-39 Identities = 161/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| |||| | || Sbjct 2125757 GCTTGGCCAGCTCACCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 2125698 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 2125697 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 2125638 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 2125637 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2125578 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 2125577 GCACCTGCTTCAGCACCTTGTA 2125556 Score = 179 bits (198), Expect = 5e-39 Identities = 161/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| |||| | || Sbjct 2148904 GCTTGGCCAGCTCACCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 2148963 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 2148964 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 2149023 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 2149024 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2149083 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 2149084 GCACCTGCTTCAGCACCTTGTA 2149105 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| |||| | || Sbjct 2209669 GCTTGGCCAGCTCACCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 2209728 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 2209729 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 2209788 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 2209789 TGTCATTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2209848 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 2209849 GCACCTGCTTCAGCACCTTGTA 2209870 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| |||| | || Sbjct 2217446 GCTTGGCCAGCTCACCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 2217387 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 2217386 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 2217327 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| | | | |||| ||||||||| |||||||| Sbjct 2217326 TGTCGTTGACGAAGGAGTTCATGATGCCCGTGGCCTTGGACGAGATGCCCGTGTCGGGGT 2217267 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 2217266 GCACCTGCTTCAGCACCTTGTA 2217245 Score = 170 bits (188), Expect = 2e-36 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| |||| | || Sbjct 2238491 GCTTGGCCAGCTCACCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 2238550 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | | ||||| |||| | Sbjct 2238551 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCAATGCGCTCGAAGA 2238610 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 2238611 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2238670 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 2238671 GCACCTGCTTCAGCACCTTGTA 2238692 Score = 161 bits (178), Expect = 1e-33 Identities = 142/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427 ||| |||||||| ||||||||||| |||| | ||| ||| ||||||||| ||||||| Sbjct 2141136 CAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGTGCGC 2141077 Query 1254428 CAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487 ||| || ||||||| | ||||||| |||| ||||||||||| || |||||||||| Sbjct 2141076 CAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGAT 2141017 Query 1254488 CGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | |||| ||||||||| |||||||||||||||||| ||||||||||| Sbjct 2141016 GCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGTA 2140960 Score = 131 bits (144), Expect = 2e-24 Identities = 151/202 (75%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||| |||||||| ||||||||||| |||| | || Sbjct 2260896 GCTTGGCCAGCTCACCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGGGA 2260837 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| || ||| || | | Sbjct 2260836 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCCGCGGTGCACTCCACGA 2260777 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| |||| | || ||| ||| | ||| | |||| ||||||||| |||||||| Sbjct 2260776 TGTAGTTGCCGAAGGAG---ATGCC---CATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2260723 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 2260722 GCACCTGCTTCAGCACCTTGTA 2260701 >seq627 Length=236091 Score = 132 bits (146), Expect = 6e-25 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || || ||| | || |||||||| ||||||||||| || | | ||| | Sbjct 158056 TGGCCAGCTCACCAGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGGGAGGTGATGG 157997 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 || ||||||||| |||| ||||| ||| ||||| ||||||| || | |||| Sbjct 157996 TGGAGCGCTTGTTGTAGTGAGCCAGGCGGGACGCCTCCCCCGCGATGCGCTCAAAGATGT 157937 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||||||||| || ||||||| ||| | |||| |||||||| ||| ||||||| Sbjct 157936 CGTTGACAAAAGAATTCATGATGCCCATGGCCTTGGAAGAGATGCCGGTGTCAGGGTGCA 157877 Query 1254526 CCTGCTTGAGCACCTTGTAGA 1254546 ||||||| ||||| ||||||| Sbjct 157876 CCTGCTTCAGCACTTTGTAGA 157856 >seq986 Length=3695877 Score = 125 bits (138), Expect = 9e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | ||| ||||| || ||||| ||||| || | | || Sbjct 1860650 GCTTGGCCAGCTCTCCTGGGAGCAGCAGACGCACAGCTGTCTGAATCTCCCGGGAGGTGA 1860591 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| ||| ||| || | ||||| || | | Sbjct 1860590 TGGTGGAGCGCTTGTTGTAATGGGCCAGGCGGGAGGCTTCTCCAGCAATGCGCTCAAAGA 1860531 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 1860530 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 1860471 Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546 | |||||||| ||||||||||||| Sbjct 1860470 GGACCTGCTTCAGCACCTTGTAGA 1860447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106658054763571