Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq780 149 4e-31 seq515 129 4e-25 >seq780 Length=11850152 Score = 149 bits (164), Expect = 4e-31 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | || || || || | |||| |||||||| ||||| ||||| || Sbjct 4730728 CCACCCCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 4730787 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| |||| ||||| ||||| || ||||||||||| || |||||||| | || Sbjct 4730788 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCGCTGCTGGTCAGGGGGA 4730847 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || |||||||| | || || || || || || || | ||| ||| ||||| Sbjct 4730848 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCGA 4730905 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | |||| ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 4730906 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 4730955 Score = 143 bits (158), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | || || || || | |||| |||||||| ||||| ||||| || Sbjct 4731184 CCACCCCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 4731243 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| |||| ||||| ||||| || || |||||||| || |||||||| | || Sbjct 4731244 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGA 4731303 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || |||||||| | || || || || || || || | ||| ||| ||||| Sbjct 4731304 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCGA 4731361 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | |||| ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 4731362 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 4731411 Score = 138 bits (152), Expect = 7e-28 Identities = 168/227 (74%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 34754 CCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGG 34813 || |||| | ||| || || || | |||| |||||||| ||||| ||||| || ||| Sbjct 4731415 CCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGG 4731474 Query 34814 CTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACC 34873 ||||| |||| ||||| ||||| || || |||||||| || |||||||| | || | Sbjct 4731475 GTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATG 4731534 Query 34874 CCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACAT 34931 || |||||||| | || || || || || || || | ||| ||| |||||| | Sbjct 4731535 CCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCGACCT 4731592 Query 34932 CAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| ||| |||||||| || || | |||||| ||||||||||||||| Sbjct 4731593 CAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 4731639 Score = 134 bits (148), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || |||| | ||| || || || | |||| || ||||| ||||| ||||| || Sbjct 4730956 CCACCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGAC 4731015 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| |||| ||||| ||||| || || |||||||| || |||||||| | || Sbjct 4731016 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGA 4731075 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | || |||||||| | || || || || || || || | ||| ||| ||||| Sbjct 4731076 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCGA 4731133 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | |||| ||| |||||||| || || | |||||| ||||||||||||||| Sbjct 4731134 CCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 4731183 >seq515 Length=1665176 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 || || ||||||| | ||| || || || | |||| |||||||| ||||| ||||| Sbjct 31774 TTACCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCA 31715 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || || |||| |||| ||||| ||||| || || ||||| |||| |||||| || | Sbjct 31714 GAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCGGGG 31655 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | || |||||||| | || || || ||| | || | ||| ||| ||| Sbjct 31654 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCA 31595 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || | ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 31594 ACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 31544 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||| || || || | |||| |||||||| ||||| ||||| || Sbjct 30403 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 30344 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| |||| |||||| || || Sbjct 30343 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30284 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | ||| ||| ||| || Sbjct 30283 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30224 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 30223 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30176 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||| || || || | |||| |||||||| ||||| ||||| || Sbjct 30631 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 30572 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| |||| |||||| || || Sbjct 30571 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30512 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | ||| ||| ||| || Sbjct 30511 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30452 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 30451 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30404 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||| || || || | |||| |||||||| ||||| ||||| || Sbjct 30859 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 30800 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| |||| |||||| || || Sbjct 30799 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30740 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | ||| ||| ||| || Sbjct 30739 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30680 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 30679 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30632 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||| || || || | |||| |||||||| ||||| ||||| || Sbjct 31087 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 31028 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| |||| |||||| || || Sbjct 31027 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30968 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | ||| ||| ||| || Sbjct 30967 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30908 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 30907 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30860 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||| || || || | |||| |||||||| ||||| ||||| || Sbjct 31315 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 31256 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| |||| |||||| || || Sbjct 31255 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 31196 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | ||| ||| ||| || Sbjct 31195 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 31136 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 31135 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 31088 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||| || || || | |||| |||||||| ||||| ||||| || Sbjct 31543 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 31484 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| |||| |||||| || || Sbjct 31483 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 31424 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | ||| ||| ||| || Sbjct 31423 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 31364 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| |||||||| || || |||||||| ||||||||||||||| Sbjct 31363 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 31316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325669527519197