Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq780 149 4e-31
seq515 129 4e-25
>seq780
Length=11850152
Score = 149 bits (164), Expect = 4e-31
Identities = 172/230 (75%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | || || || || | |||| |||||||| ||||| ||||| ||
Sbjct 4730728 CCACCCCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 4730787
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| ||||| |||| ||||| ||||| || ||||||||||| || |||||||| | ||
Sbjct 4730788 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCGCTGCTGGTCAGGGGGA 4730847
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || |||||||| | || || || || || || || | ||| ||| |||||
Sbjct 4730848 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCGA 4730905
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| |||| ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 4730906 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 4730955
Score = 143 bits (158), Expect = 2e-29
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | || || || || | |||| |||||||| ||||| ||||| ||
Sbjct 4731184 CCACCCCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 4731243
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| ||||| |||| ||||| ||||| || || |||||||| || |||||||| | ||
Sbjct 4731244 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGA 4731303
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || |||||||| | || || || || || || || | ||| ||| |||||
Sbjct 4731304 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCGA 4731361
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| |||| ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 4731362 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 4731411
Score = 138 bits (152), Expect = 7e-28
Identities = 168/227 (74%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 34754 CCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGG 34813
|| |||| | ||| || || || | |||| |||||||| ||||| ||||| || |||
Sbjct 4731415 CCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGG 4731474
Query 34814 CTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACC 34873
||||| |||| ||||| ||||| || || |||||||| || |||||||| | || |
Sbjct 4731475 GTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATG 4731534
Query 34874 CCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACAT 34931
|| |||||||| | || || || || || || || | ||| ||| |||||| |
Sbjct 4731535 CCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCGACCT 4731592
Query 34932 CAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||| ||| |||||||| || || | |||||| |||||||||||||||
Sbjct 4731593 CAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 4731639
Score = 134 bits (148), Expect = 9e-27
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| || |||| | ||| || || || | |||| || ||||| ||||| ||||| ||
Sbjct 4730956 CCACCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGAC 4731015
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| ||||| |||| ||||| ||||| || || |||||||| || |||||||| | ||
Sbjct 4731016 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGA 4731075
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| || |||||||| | || || || || || || || | ||| ||| |||||
Sbjct 4731076 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCGA 4731133
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| |||| ||| |||||||| || || | |||||| |||||||||||||||
Sbjct 4731134 CCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 4731183
>seq515
Length=1665176
Score = 129 bits (142), Expect = 4e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
|| || ||||||| | ||| || || || | |||| |||||||| ||||| |||||
Sbjct 31774 TTACCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCA 31715
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867
|| || |||| |||| ||||| ||||| || || ||||| |||| |||||| || |
Sbjct 31714 GAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCGGGG 31655
Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927
|| | || |||||||| | || || || ||| | || | ||| ||| |||
Sbjct 31654 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCA 31595
Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || | ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 31594 ACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 31544
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || || || | |||| |||||||| ||||| ||||| ||
Sbjct 30403 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 30344
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || ||||| |||| |||||| || ||
Sbjct 30343 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30284
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | || | ||| ||| ||| ||
Sbjct 30283 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30224
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 30223 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30176
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || || || | |||| |||||||| ||||| ||||| ||
Sbjct 30631 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 30572
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || ||||| |||| |||||| || ||
Sbjct 30571 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30512
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | || | ||| ||| ||| ||
Sbjct 30511 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30452
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 30451 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30404
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || || || | |||| |||||||| ||||| ||||| ||
Sbjct 30859 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 30800
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || ||||| |||| |||||| || ||
Sbjct 30799 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30740
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | || | ||| ||| ||| ||
Sbjct 30739 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30680
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 30679 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30632
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || || || | |||| |||||||| ||||| ||||| ||
Sbjct 31087 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 31028
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || ||||| |||| |||||| || ||
Sbjct 31027 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30968
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | || | ||| ||| ||| ||
Sbjct 30967 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30908
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 30907 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30860
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || || || | |||| |||||||| ||||| ||||| ||
Sbjct 31315 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 31256
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || ||||| |||| |||||| || ||
Sbjct 31255 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 31196
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | || | ||| ||| ||| ||
Sbjct 31195 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 31136
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 31135 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 31088
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | ||| || || || | |||| |||||||| ||||| ||||| ||
Sbjct 31543 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 31484
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || ||||| |||| |||||| || ||
Sbjct 31483 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 31424
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | || || || ||| | || | ||| ||| ||| ||
Sbjct 31423 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 31364
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| || || |||||||| |||||||||||||||
Sbjct 31363 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 31316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325669527519197
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |