Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq683 131 1e-24
seq553 96.9 3e-14
seq792 91.5 1e-12
>seq683
Length=2443633
Score = 131 bits (144), Expect = 1e-24
Identities = 676/1065 (63%), Gaps = 24/1065 (2%)
Strand=Plus/Plus
Query 281424 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 281483
||||| | ||||| || ||||| |||||||| | ||||| ||||| ||||| || ||||
Sbjct 555960 CGGCACTGACATTCAGGATACCGTTGGCATCGATGTCAAAAGTGACCTCAATCTGGGGGA 556019
Query 281484 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 281543
| || | | || || || || || || | || | ||||| || || || |
Sbjct 556020 CTCCACGGGGTGCTGGGGGAATGCCCGTTAAGTCGAACTTGCCCAGCAAGTTGTTGTCCT 556079
Query 281544 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGA 281601
|||| | || ||||||||| | | |||| || | ||| | | || || || ||
Sbjct 556080 TAGTCATAGCTCTCTCACCCTCGTACACCTGGACCAGGACACTGC--TCTGGTTGTCCGA 556137
Query 281602 ATAAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATAT 281660
|| || || || |||| ||| ||| ||||| || ||||| | | || | |
Sbjct 556138 GTAGGTGGTGAAGG-TCTGAGTTTGTTTGGTGGGAATAGTGGTGTTGCGCTTGATGAGAG 556196
Query 281661 TGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGA 281720
|||||| | |||||||| || || | || || || ||||| |||||||| | || |
Sbjct 556197 CGGTCATCACTCCACCAGCCGTCTCAATGCCCAGGGACAGAGGGGTGACATCCAACAGCA 556256
Query 281721 CAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCAC 281780
| || || | || ||| | | || | |||||||||||||| | |||||| |
Sbjct 556257 GCAGATCCTGCACATTCTCAGACTTGTCTCCCATGAGAATAGCTGCTTGCACAGCAGCGC 556316
Query 281781 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 281840
|||| |||||||||||||| || || | | | || || | ||| |||||||| || |
Sbjct 556317 CATAAGCAACAGCTTCATCGGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGT 556376
Query 281841 TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 281900
|| || | | | ||| || ||||| | || || || || | ||||| || |
Sbjct 556377 CCTGTAGCAGCTTTTGGATCTTGGGGATACGGGTAGAGCCACCCACCAGCACAATCTCCT 556436
Query 281901 GCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAG 281960
| | ||| || || || || | ||| | | | || || || || || ||
Sbjct 556437 GTATCTGACCCTTGTCAAGCTTGGCATCACGCAGAGCCTTCTCCACAGGCTCCAGGGTGC 556496
Query 281961 CTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA 282019
| | || | || | | || || ||||| || | ||| || || | || ||
Sbjct 556497 CACGGAAAAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGT--GATGGAGGTGTAGAA 556554
Query 282020 -TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 282078
||||| || ||| | | ||||||| ||||| ||| ||| || ||||| || |
Sbjct 556555 GTCAATGCCCTCGTAGAGGGAATCAATCTCAATGCTAGCTTGTGTGGAAGAGCTGAGGGT 556614
Query 282079 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTC 282136
|| || || | ||||| ||||| | || | | | || | ||| ||| |
Sbjct 556615 GCGCTTTGCCCTCTCACAAGCTGTACGCAGCCGCCTCACTGC--TCGCTTGTTGCCAGCA 556672
Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTAT 282194
| || ||| | || | |||||| ||||| |||| ||| | || | || || |
Sbjct 556673 ATGTCGCGTTTGTGCTTACGCTTGAATTCTTC--CACAAAATGGTTCACCATGCGGTTGT 556730
Query 282195 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 282254
|||| || || || |||| | || | || | || | | || | || | |||||
Sbjct 556731 CAAAGTCCTCCCCACCCAGGTGGGTGTCACCAGCTGTGGACTTCACCTCAAAGATTCCAT 556790
Query 282255 CTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 282314
| |||| | | || | |||||| || || ||||||| ||||| || || ||||
Sbjct 556791 CCTCAATGGTAAGAATGGACACATCAAAAGTACCCCCACCCAAGTCAAAGATGAGAACAT 556850
Query 282315 TCATTTCTTTGTCTTGG------TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368
|| | ||| | || || || || | ||||| || | |||||| || || |
Sbjct 556851 TCTTCTCTCCAGCCCGGGTACCTTTCTTGTCCAAGCCATAGGCTATAGCAGCTGCTGTGG 556910
Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428
| ||||| ||||| | || |||||||| |||| || | || |||||||| || || |
Sbjct 556911 GCTCATTGATAATACGCATCACATTAAGGCCAGTGATGGTGCCAGCATCTTTGGTAGCCT 556970
Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473
| | || || || || || || ||||| || || || || ||||
Sbjct 556971 GGCGCTGGGAGTCATTGAAGTAAGCAGGCACTGTGATGACAGCAT 557015
>seq553
Length=19410955
Score = 96.9 bits (106), Expect = 3e-14
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235
||| || || ||| | || ||||| ||||| || |||||| | ||| | | | |||||
Sbjct 1092484 TGTTGTGGCTACAGTGGCGTTTGGAATGGGCATCAATAAAGCAGATATCCGGATGGTTAT 1092425
Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295
|||||| || || || ||| | || ||| ||||||||||||||||| ||||| |||||
Sbjct 1092424 TCATTATGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGGAGAGCTGGTCG 1092365
Query 131296 TGATGG 131301
||||||
Sbjct 1092364 TGATGG 1092359
>seq792
Length=3412358
Score = 91.5 bits (100), Expect = 1e-12
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749
|||||| |||||||||||||| | |||| |||||| || || ||||| || ||||
Sbjct 2184220 CAAAAACTGTATTGGTTGGATTCATTGCAACTTGATTCTTTGCAGCATCGCCGATCAACC 2184279
Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809
|| || ||||| || | ||| || ||| || || || || || || ||||| ||||
Sbjct 2184280 TCTCGGTATCTGTGAAGGCAACGTAGCTTGGCGTGGTCCGGTTGCCCTGGTCATTGGCAA 2184339
Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869
| ||||| || || || | || | || || ||||| | | || || || | |||||
Sbjct 2184340 TGATTTCCACCTTCCCGTGCTGGAAGACGCCAACACAGGAATAGGTGGTGCCAAGATCAA 2184399
Query 282870 TACCAATAGC 282879
| |||| |||
Sbjct 2184400 TTCCAACAGC 2184409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740342551477038
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |