Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq431 87.8 2e-12
seq515 86.0 6e-12
>seq431
Length=331394
Score = 87.8 bits (96), Expect = 2e-12
Identities = 84/105 (80%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 151334 ACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACT-TTGATTGCTTTT 151392
|||||||| | ||||| |||||||||||| || ||| ||| | || |||||||| ||
Sbjct 62417 ACTATTTCTGTACACAGATTGCTGCATTTGAT-GGTCCCCAAGTTCTGCTGATTGCTCTT 62475
Query 151393 GCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTC 151437
|||||||||| ||| ||||| | |||||| |||||||| || ||
Sbjct 62476 TCGGTTGCAAGAGTCTTTGTAGAGCATGTATGGTGTGCCAGTCTC 62520
>seq515
Length=1665176
Score = 86.0 bits (94), Expect = 6e-12
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGA 137255
|||| |||| ||| | || ||||| || || |||||||| || | |||| || |
Sbjct 31759 CGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCA 31700
Query 137256 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 137315
||||| || || || |||||| |||| || | |||||||||||| || |||||||| ||
Sbjct 31699 -TCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCGGGGGGAATGCCTTCCTT 31641
Query 137316 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCAC 137375
||| || || |||| | || | ||||| |||| || || || | || |
Sbjct 31640 GTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGAT 31581
Query 137376 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|||||||| |||| || || || || || |||||
Sbjct 31580 GGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488508195831600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |