Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq515 174 3e-38
seq780 149 1e-30
seq484 118 2e-21
>seq515
Length=1665176
Score = 174 bits (192), Expect = 3e-38
Identities = 176/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || |||| ||||| |||| ||||| || ||||| ||||| || || || ||||
Sbjct 31773 TACCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAG 31714
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || ||||| || || || ||||||||||| |||||||| ||||| || |
Sbjct 31713 AGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCGGGGG 31654
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || || ||||| || ||||| || ||||| || ||| | || || |
Sbjct 31653 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAA 31594
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||||| || || |||||||| |||| ||||| ||||| ||||||||
Sbjct 31593 CCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31545
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||||| |||| ||||| || ||||| ||||| || || || |||||
Sbjct 30403 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 30344
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| |||||||| ||||| | ||
Sbjct 30343 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30284
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || ||||| || ||||| || ||| | || || ||
Sbjct 30283 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30224
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || |||||||| |||| ||||| ||||| ||||||||
Sbjct 30223 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30177
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||||| |||| ||||| || ||||| ||||| || || || |||||
Sbjct 30631 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 30572
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| |||||||| ||||| | ||
Sbjct 30571 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30512
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || ||||| || ||||| || ||| | || || ||
Sbjct 30511 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30452
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || |||||||| |||| ||||| ||||| ||||||||
Sbjct 30451 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30405
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||||| |||| ||||| || ||||| ||||| || || || |||||
Sbjct 30859 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 30800
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| |||||||| ||||| | ||
Sbjct 30799 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30740
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || ||||| || ||||| || ||| | || || ||
Sbjct 30739 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30680
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || |||||||| |||| ||||| ||||| ||||||||
Sbjct 30679 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30633
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||||| |||| ||||| || ||||| ||||| || || || |||||
Sbjct 31087 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 31028
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| |||||||| ||||| | ||
Sbjct 31027 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30968
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || ||||| || ||||| || ||| | || || ||
Sbjct 30967 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 30908
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || |||||||| |||| ||||| ||||| ||||||||
Sbjct 30907 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30861
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||||| |||| ||||| || ||||| ||||| || || || |||||
Sbjct 31315 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 31256
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| |||||||| ||||| | ||
Sbjct 31255 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 31196
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || ||||| || ||||| || ||| | || || ||
Sbjct 31195 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 31136
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || |||||||| |||| ||||| ||||| ||||||||
Sbjct 31135 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31089
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||||| |||| ||||| || ||||| ||||| || || || |||||
Sbjct 31543 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 31484
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| |||||||| ||||| | ||
Sbjct 31483 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 31424
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || ||||| || ||||| || ||| | || || ||
Sbjct 31423 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACC 31364
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || |||||||| |||| ||||| ||||| ||||||||
Sbjct 31363 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 31317
Score = 114 bits (126), Expect = 3e-20
Identities = 122/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| ||||| |||| ||||| || ||||| ||||| || || || |||||
Sbjct 30175 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 30116
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| |||||||| ||||| | ||
Sbjct 30115 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGAGGGA 30056
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAAT 82744
|| |||||||| || || ||||| || ||||| || |||||
Sbjct 30055 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAAT 30015
>seq780
Length=11850152
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||||| |||||| || | || || || ||||||||||| || || || || ||
Sbjct 4730956 CCACCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGAC 4731015
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| || | || || || || ||
Sbjct 4731016 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGA 4731075
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || || ||||| ||||| || ||| | || || ||
Sbjct 4731076 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACC 4731135
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| ||||| ||||| ||||| ||||||||
Sbjct 4731136 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 4731182
Score = 143 bits (158), Expect = 5e-29
Identities = 166/224 (74%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 82587 CCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGA 82646
||||||| |||||| || | || || || ||||| ||||| || || || || || ||
Sbjct 4731415 CCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGG 4731474
Query 82647 ATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATT 82706
| | || ||||| || || || ||||||||||| || | || || || || || ||
Sbjct 4731475 GTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATG 4731534
Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766
|||||||| || || ||||| || || ||||| ||||| || ||| | || || || ||
Sbjct 4731535 CCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCA 4731594
Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || || |||||||| ||||| ||||| ||||| ||||||||
Sbjct 4731595 AGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 4731638
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| || || || | || || || ||||| ||||| || || || || ||
Sbjct 4731184 CCACCCCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 4731243
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| || | || || || || ||
Sbjct 4731244 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGA 4731303
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || || ||||| ||||| || ||| | || || ||
Sbjct 4731304 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACC 4731363
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| |||| ||||| ||||| ||||||||
Sbjct 4731364 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4731410
>seq484
Length=996536
Score = 118 bits (130), Expect = 2e-21
Identities = 124/163 (76%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 60149 GCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATA 60208
|| ||||||||||| ||| | |||||||| || ||||| || ||||| || || |||||
Sbjct 733056 GCTTTATGGTGGTATTATGTCTCTAAAGGAATTGAATATTTGGATACAGTATTCTTCATT 732997
Query 60209 CTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTT 60268
|| ||||| || ||||| || ||||||| | || || ||||| ||||| || |||||
Sbjct 732996 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 732937
Query 60269 ACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311
|| || | ||| | || ||||| ||| |||| || || ||||
Sbjct 732936 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACAAG 732894
Score = 105 bits (116), Expect = 1e-17
Identities = 103/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 60310 AGCATTTTTCGGAGCTCAGTTGAATTCCTTAATCCATGTTATTATGTATACTTATTATGG 60369
||| ||||||||||||||| ||||| | || |||||||| |||||||||| ||||||||
Sbjct 730699 AGCTTTTTTCGGAGCTCAGATGAATGCATTTATCCATGTCATTATGTATATGTATTATGG 730640
Query 60370 TATGGCGGCGTGTGGACCTATGTTTAAAAAGTATTTATGGTGGAAGCGTTATCTTACTAT 60429
| || || ||||| |||| ||| | || || | |||||||| || || | |||||
Sbjct 730639 ATTAGCTGCCTGTGGCCCTAAATTTCAGAAATACCTGTGGTGGAAACGATACTTGACTAT 730580
Query 60430 AATGCAATTGTTA 60442
| |||| ||| ||
Sbjct 730579 ATTGCAGTTGGTA 730567
Score = 84.2 bits (92), Expect = 4e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 60443 CAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGTCCGTTTCCA 60502
|| |||||| | |||| || ||||| || |||| ||||| || |||||||| || ||
Sbjct 730064 CAGTTCCATGTGACTATTGGCCATACAGCCTTGTCTATTTATATTGATTGTCCTTTCCCT 730005
Query 60503 AAATGGACACAATGGTCAGTTATCATTTATTCTATTACTTTTATATTACTGTTTGGTAAC 60562
|| |||| || ||| || || | ||| || | || || || || ||||||||||||
Sbjct 730004 AAGTGGATGCACTGGGGTGTAATTTTCTATGCTGTCACCTTCATTTTCCTGTTTGGTAAC 729945
Query 60563 TTCTATTTTAGAACATACAAG 60583
||||| | | | ||||| |||
Sbjct 729944 TTCTACTATCGGACATATAAG 729924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981753445447557
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