Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq576 120 4e-22 >seq576 Length=3428205 Score = 120 bits (132), Expect = 4e-22 Identities = 272/403 (67%), Gaps = 12/403 (3%) Strand=Plus/Plus Query 162655 TTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTT--AACGC 162712 |||||||| | |||||||| | || || || || || | |||||||| || ||| Sbjct 1683492 TTGGTCTTTATAGGAAAGTCCATACCACAAAGGTTTATTAGGTATTTCCAGTTTGAACTT 1683551 Query 162713 TGAGTCC-GTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCG 162771 | ||| ||| ||||| | | ||||| | || ||||| || | ||||| || || Sbjct 1683552 T---TCCTGTAGAGATCTTTCATGCAGTTAATGTCTGCCTGCACCCTGCTCCATGAAGCA 1683608 Query 162772 TACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCC 162831 ||||| || ||||| ||| ||| | ||||||||| || ||||| || ||||| ||| Sbjct 1683609 TACACAACACTCTCTAACTGGCTGGAAATAAAGACATTCTCAAAACATGAGACTATGCCC 1683668 Query 162832 ATCACGGCCAGTGAGAACA---TCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGA 162888 |||| || || | || | || || ||| | || || || | |||||| | | Sbjct 1683669 TTCACAGC-AGCAAAAAAAGACTCTGGAGACTTTT--TGTCAACATGAATGCAGTAAAAA 1683725 Query 162889 TTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACC 162948 ||||||||||| ||||| | || || | ||| || | |||||| || || || | ||| Sbjct 1683726 TTCTGAGGGGCATAGATTGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACC 1683785 Query 162949 ACGATAGAATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAGACCCTGTAAAGTAC 163008 || || || || || || || || || || || || ||||||| | ||| |||| Sbjct 1683786 ACTATTGAGTAAGCAATTGGAAATTCTGCTTCTTCATTGCTGAGAGGTTCCATAATGTAC 1683845 Query 163009 TTGCGGTCCCTCACAAACGCCGCACAGTCCTCCGTCATGTTAA 163051 || || | | || | |||||||| | |||||||||| Sbjct 1683846 TTCCGAGTCTTGGTGAAAGAGGCACAGTCTGCTGTCATGTTAA 1683888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578389608164800