Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq780 107 1e-18
>seq780
Length=11850152
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|||||||||| ||| | ||| | ||| || ||| ||||| || |||||||| || ||
Sbjct 4730956 CCACCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGAC 4731015
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || || || ||||| |||| |||||||| || | ||
Sbjct 4731016 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGA 4731075
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701
| ||||| ||||| || || |||| ||| ||| |||||| || | || ||
Sbjct 4731076 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CATTCTCAATGGTGTCACTGGGCTCGAC 4731134
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| || || || || || || || ||||||||||||||
Sbjct 4731135 CTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 4731182
Score = 102 bits (112), Expect = 5e-17
Identities = 164/232 (71%), Gaps = 3/232 (1%)
Strand=Plus/Plus
Query 33524 CACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGA 33583
||||||||| ||| | ||| | ||| || ||| || || || |||||||| || || |
Sbjct 4731413 CACCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACA 4731472
Query 33584 GTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCA 33643
| ||||| | || |||| || || || ||||| |||| |||||||| || | || |
Sbjct 4731473 GGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAA 4731532
Query 33644 CACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACG 33702
||||| ||||| || || |||| ||| ||| |||||| || | || ||
Sbjct 4731533 TGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CATTCTCAATGGTGTCACTGGGCTCGACC 4731591
Query 33703 TCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754
|||| ||||| || || || || || || || |||||||||||||| ||||
Sbjct 4731592 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT-GTTG 4731642
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| |||| || | ||| | ||| || ||| || || || |||||||| || ||
Sbjct 4731184 CCACCCCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 4731243
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || || || ||||| |||| |||||||| || | ||
Sbjct 4731244 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGA 4731303
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701
| ||||| ||||| || || |||| ||| ||| |||||| || | || ||
Sbjct 4731304 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CATTCTCAATGGTGTCACTGGGCTCGAC 4731362
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| || || || || | || || ||||||||||||||
Sbjct 4731363 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4731410
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| |||| || | ||| | ||| || ||| || || || |||||||| || ||
Sbjct 4730728 CCACCCCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 4730787
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || |||| || || || || || |||| |||||||| || | ||
Sbjct 4730788 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCGCTGCTGGTCAGGGGGA 4730847
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701
| ||||| ||||| || || |||| ||| ||| |||||| || | || ||
Sbjct 4730848 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CATTCTCAATGGTGTCACTGGGCTCGAC 4730906
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| || || || || | || || ||||||||||||||
Sbjct 4730907 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4730954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328680512352960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |