Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq827 203 5e-46
seq627 147 3e-29
seq986 143 4e-28
>seq827
Length=3065556
Score = 203 bits (224), Expect = 5e-46
Identities = 183/229 (80%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 2125556 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 2125609
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| |||| ||||||| | ||||||| |||
Sbjct 2125610 GGCATCATGAACTCCTTTGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 2125669
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | |||| ||||||||||| ||||||||
Sbjct 2125670 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 2125729
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||||||||||||||||||||
Sbjct 2125730 CTGCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 2125778
Score = 203 bits (224), Expect = 5e-46
Identities = 183/229 (80%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 2149105 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 2149052
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| |||| ||||||| | ||||||| |||
Sbjct 2149051 GGCATCATGAACTCCTTTGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 2148992
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | |||| ||||||||||| ||||||||
Sbjct 2148991 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 2148932
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||||||||||||||||||||
Sbjct 2148931 CTGCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 2148883
Score = 194 bits (214), Expect = 2e-43
Identities = 181/229 (79%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 2209870 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 2209817
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||| ||||| |||| ||||||| | ||||||| |||
Sbjct 2209816 GGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 2209757
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | |||| ||||||||||| ||||||||
Sbjct 2209756 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 2209697
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||||||||||||||||||||
Sbjct 2209696 CTGCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 2209648
Score = 194 bits (214), Expect = 2e-43
Identities = 181/229 (79%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| ||| |
Sbjct 2217245 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCACG 2217298
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | ||||||| |||
Sbjct 2217299 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 2217358
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | |||| ||||||||||| ||||||||
Sbjct 2217359 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 2217418
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||||||||||||||||||||
Sbjct 2217419 CTGCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 2217467
Score = 194 bits (214), Expect = 2e-43
Identities = 181/229 (79%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 2238692 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 2238639
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||| | | ||||||| |||
Sbjct 2238638 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATTGCCGGCGAGGCCTCGCGC 2238579
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | |||| ||||||||||| ||||||||
Sbjct 2238578 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 2238519
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||||||||||||||||||||
Sbjct 2238518 CTGCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 2238470
Score = 147 bits (162), Expect = 3e-29
Identities = 143/183 (78%), Gaps = 6/183 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 2140960 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 2141013
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| ||||||| | ||||||| |||
Sbjct 2141014 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 2141073
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | |||| ||||||||||| ||||||||
Sbjct 2141074 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 2141133
Query 725094 CTG 725096
|||
Sbjct 2141134 CTG 2141136
Score = 145 bits (160), Expect = 1e-28
Identities = 170/229 (74%), Gaps = 12/229 (5%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 2260701 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 2260754
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||| || || | |||| |||| | || ||| || ||||||| |||
Sbjct 2260755 GGCATC------TCCTTCGGCAACTACATCGTGGAGTGCACCGCGGGCGAGGCCTCGCGC 2260808
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | |||| ||||||||||| ||||||||
Sbjct 2260809 CTGGCGCACTACAACAAGCGCTCCACCATCCCCTCGCGGGAGATCCAGACGGCCGTGCGG 2260868
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| ||| || ||||||| |||||||||||||||||||||||
Sbjct 2260869 CTGCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 2260917
>seq627
Length=236091
Score = 147 bits (162), Expect = 3e-29
Identities = 172/231 (74%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971
||||||| ||||| |||||||||||||| |||| |||| || |||| |||
Sbjct 157856 TCTACAAAGTGCTGAAGCAGGTGCACCCTGACACCGG-----CATC-TCTTCCAAGGCCA 157909
Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031
|| |||||||| || |||||||||||||| | || ||||||| ||||| |
Sbjct 157910 TGGGCATCATGAATTCTTTTGTCAACGACATCTTTGAGCGCATCGCGGGGGAGGCGTCCC 157969
Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
||||||| | || |||||||||| ||| ||| | | || ||||||||||| |||||||
Sbjct 157970 GCCTGGCTCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACGGCCGTGC 158029
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| || | ||| || || ||||||| || |||||||||||||||||||
Sbjct 158030 GGCTCCTGCTGCCTGGTGAGCTGGCCAAACATGCCGTCTCCGAGGGCACCA 158080
>seq986
Length=3695877
Score = 143 bits (158), Expect = 4e-28
Identities = 179/244 (73%), Gaps = 6/244 (2%)
Strand=Plus/Plus
Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958
||||| || | ||||||||||||| |||||||| |||||| |||| ||||
Sbjct 1860434 TACTCCATCTATGTCTACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC- 1860487
Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018
||| |||| ||||| ||||||||||| || ||||||||||| | || ||||| |
Sbjct 1860488 TCCTCCAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCTTTGAGCGCATTGCT 1860547
Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078
|| ||| |||||||| | | |||||||||| ||| ||| | | || |||||
Sbjct 1860548 GGAGAAGCCTCCCGCCTGGCCCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATT 1860607
Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138
||||| || ||||| ||| | | | || || ||||||| |||||||||||| ||||||
Sbjct 1860608 CAGACAGCTGTGCGTCTGCTGCTCCCAGGAGAGCTGGCCAAGCACGCCGTCTCGGAGGGC 1860667
Query 725139 ACCA 725142
||||
Sbjct 1860668 ACCA 1860671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177245702873806
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