Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq780 132 4e-26 seq515 93.3 4e-14 >seq780 Length=11850152 Score = 132 bits (146), Expect = 4e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | || ||| ||| | || ||||||||||| || ||||| Sbjct 4731448 TCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 4731507 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| |||||||||||| | |||| || ||||||||| |||||| ||||| | | Sbjct 4731508 ATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 4731567 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || ||||| || |||||| Sbjct 4731568 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACA 4731627 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 4731628 AAGATCTGCAT 4731638 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | || ||| ||| | || ||||||||||| || ||||| Sbjct 4730992 TCTTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 4731051 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| |||||||||||| | |||| || ||||||||| |||||| ||||| | | Sbjct 4731052 ATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 4731111 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || ||||| || |||||| Sbjct 4731112 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACA 4731171 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 4731172 AAGATCTGCAT 4731182 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | || ||| ||| | || ||||||||||| || ||||| Sbjct 4731220 TCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 4731279 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| |||||||||||| | |||| || ||||||||| |||||| ||||| | | Sbjct 4731280 ATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 4731339 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || |||| || |||||| Sbjct 4731340 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 4731399 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 4731400 AAGATCTGCAT 4731410 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | || ||| ||| | || ||||||||||| || || || Sbjct 4730764 TCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAG 4730823 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| |||||||||||| | |||| || ||||||||| |||||| ||||| | | Sbjct 4730824 ATCAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 4730883 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || |||| || |||||| Sbjct 4730884 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 4730943 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 4730944 AAGATCTGCAT 4730954 >seq515 Length=1665176 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 30367 TCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAG 30308 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | | ||||| || || |||| || ||||||||| |||||| ||| | | Sbjct 30307 ATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTC 30248 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || |||||| Sbjct 30247 TCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 30188 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 30187 AAGATCTGCAT 30177 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 30595 TCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAG 30536 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | | ||||| || || |||| || ||||||||| |||||| ||| | | Sbjct 30535 ATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTC 30476 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || |||||| Sbjct 30475 TCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 30416 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 30415 AAGATCTGCAT 30405 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 30823 TCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAG 30764 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | | ||||| || || |||| || ||||||||| |||||| ||| | | Sbjct 30763 ATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTC 30704 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || |||||| Sbjct 30703 TCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 30644 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 30643 AAGATCTGCAT 30633 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 31051 TCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAG 30992 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | | ||||| || || |||| || ||||||||| |||||| ||| | | Sbjct 30991 ATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTC 30932 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || |||||| Sbjct 30931 TCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 30872 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 30871 AAGATCTGCAT 30861 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 31279 TCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAG 31220 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | | ||||| || || |||| || ||||||||| |||||| ||| | | Sbjct 31219 ATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTC 31160 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || |||||| Sbjct 31159 TCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 31100 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 31099 AAGATCTGCAT 31089 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 31507 TCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAG 31448 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | | ||||| || || |||| || ||||||||| |||||| ||| | | Sbjct 31447 ATGAGTCTTTGCTGATCAGAGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTC 31388 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || |||||| Sbjct 31387 TCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 31328 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 31327 AAGATCTGCAT 31317 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 31735 TCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAG 31676 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | | ||||| || | |||| || ||||||||| |||||| ||| | | Sbjct 31675 ATGAGTCTTTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTC 31616 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || |||||| Sbjct 31615 TCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 31556 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 31555 AAGATCTGCAT 31545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450760562464040