Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq886 89.7 7e-13 >seq886 Length=3399623 Score = 89.7 bits (98), Expect = 7e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 214100 GAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCAC 214159 ||| ||||||| | || || || || ||| |||| || | || |||||||| || ||| Sbjct 1177244 GAGGTGTTTGGTTTGGTCCCGGGCTTGATGATGTATGCTACAATATGGCTGAGGGAACAC 1177303 Query 214160 AACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTC 214219 ||| |||| || ||| | |||||||| ||||| || || ||| | || || ||||||||| Sbjct 1177304 AACCGGGTCTGTGACATCCTGAAACAGGAGCATCCAGAGTGGGATGATGAGCAGCTGTTC 1177363 Query 214220 CA 214221 || Sbjct 1177364 CA 1177365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723287788161120