Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq123 132 7e-26
seq12 132 7e-26
seq431 100 4e-16
>seq123
Length=3649919
Score = 132 bits (146), Expect = 7e-26
Identities = 111/136 (82%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
||||||||||||| |||| ||| || ||||| |||||||||||||||| || | || |
Sbjct 2429725 CCTCATCTCTACTGATTAGTTCATTTGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 2429666
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| |||||||| || | |||||||| |||||||||||||| ||||| ||||||||||| |
Sbjct 2429665 TCAGCCAAAAAATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAG 2429606
Query 39759 CAACAAGTCTCTCTCC 39774
| || | | ||||||
Sbjct 2429605 CTACTACACGCTCTCC 2429590
Score = 95.1 bits (104), Expect = 2e-14
Identities = 78/95 (82%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 39311 GACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCT 39370
||||||||||||||| | || |||||||| || | ||||| || ||||| || ||||||
Sbjct 2431001 GACATAACTCCCATTCTCTGATATTCACCTACTCTCTTCTCAAAGAAATTGGTCTTGCCT 2430942
Query 39371 TCCAATGATATATTTTCCATGAAATCAAACGGATT 39405
|||| || || ||||||||||| ||||| |||||
Sbjct 2430941 TCCAGAGAGATGTTTTCCATGAAGTCAAAAGGATT 2430907
>seq12
Length=3827242
Score = 132 bits (146), Expect = 7e-26
Identities = 111/136 (82%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||||||||| ||||| | ||| || || || || ||||||||||| || || | || |
Sbjct 3384539 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTTTTCT 3384480
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| ||||||||||| |||||||| || || ||||||||||||||||| ||||| ||||| |
Sbjct 3384479 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 3384420
Query 39759 CAACAAGTCTCTCTCC 39774
|||| | |||||| ||
Sbjct 3384419 CAACCACTCTCTCACC 3384404
Score = 86.0 bits (94), Expect = 9e-12
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853
||||||||| | ||||| || ||||||||||| ||||||||||||||||| |||||||||
Sbjct 3382007 ATCCACTTCAGAGCCCAGTCTGCTTTCTTCTTGACACAAGGCATTGTTTCAATAGCATTA 3381948
Query 39854 AA 39855
||
Sbjct 3381947 AA 3381946
>seq431
Length=331394
Score = 100 bits (110), Expect = 4e-16
Identities = 123/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393
|||| |||| ||| || ||||| ||||| ||||| || | || || || ||||| || |
Sbjct 69830 CACTGAATACTTTCTTAGTTTCTTTGTGCAAATTGGACACCGCAATCCTTGCTGCCAGGA 69889
Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTA 70453
|||||||||| || |||| || || | || || || |||| ||||| | ||||| |
Sbjct 69890 TAGCATAGTCCGGGTGTTTGGTGGTCAAGGTTGCGGCCGTTTCAGCAGCCAGTGTATCCA 69949
Query 70454 ATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501
||| | ||||| || || | || ||||| ||||| || |||||||
Sbjct 69950 GTTCCACCGTTGTGACACCACTGTACAGCCCCTGAATCACCTTCATGG 69997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686858458171320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |