Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq977 104 2e-17
seq123 102 6e-17
seq12 95.1 1e-14
>seq977
Length=740791
Score = 104 bits (114), Expect = 2e-17
Identities = 117/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106
||||||| ||||| || || ||| | || ||||| || ||| ||||||||| |||
Sbjct 261395 TGATGGCTTTGCCTCCATGCCATGCCCTTTGCCAGTTCTATGTTCTAAATGGTGAATTGT 261336
Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166
| || ||| | ||||| || || || || ||||||||||| || || || || || || |
Sbjct 261335 CTTGCCAACTCTATCAGAGGTCCGGAGATATGGGACTAGGAGTGCCTTTCAATATTGCCA 261276
Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203
| ||| | |||||||| || |||||||| || || ||
Sbjct 261275 GCTATTCACTGCTCACATACATGATTGCCCATGTCAC 261239
>seq123
Length=3649919
Score = 102 bits (112), Expect = 6e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182
||||| || | || || ||||||| |||||||| || |||||||| || || |||||
Sbjct 2429590 GGAGAGCGTGTAGTAGCTTTTGCAGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCA 2429649
Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242
| || |||||| | |||||| |||| || |||||||| | || ||||||||||| ||
Sbjct 2429650 TCAATTTTTTGGCTGAAGAAAAGAGGATTAATGCCTGGACTCACTTTTTCAAATGAACTA 2429709
Query 44243 ATAAGTCGTGATGA 44256
|| ||| | |||||
Sbjct 2429710 ATCAGTAGAGATGA 2429723
Score = 82.4 bits (90), Expect = 6e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000
|||| ||||| || || || || || |||||||| ||||| ||||||||||||||||| |
Sbjct 2427134 GTTTCTATGGCTTCCAGATCGCAATGGAAAATATACATTCAGAAATGTACAGTCTTCTTA 2427193
Query 44001 TAGATACGTACATCAAAGAT 44020
| || || ||||| ||||||
Sbjct 2427194 TTGACACCTACATTAAAGAT 2427213
>seq12
Length=3827242
Score = 95.1 bits (104), Expect = 1e-14
Identities = 103/136 (76%), Gaps = 3/136 (2%)
Strand=Plus/Plus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
||||||| |||||||| ||||| |||||||| ||||||| |||||||| || ||||| |
Sbjct 3389649 AAAACCCTTTTGATTTCATGGAGAATATTTCTCTGGAAGGAAAAACAAATTTCTTTGAGA 3389708
Query 44553 AACGCGTTGGAGAATATCAGCGAATGGGCGTCATG---ATAACAAGTGACAATAAATTTA 44609
| || ||| |||||||||||| | | || ||| ||||| |||||| || |
Sbjct 3389709 AGCGGGTTTCAGAATATCAGCGTTTTGCTGTTATGGCAGAAACAATGGACAATGTCTTCA 3389768
Query 44610 CTACGGATGAAGATTT 44625
|| ||||| ||||||
Sbjct 3389769 CTCTGGATGCAGATTT 3389784
Score = 89.7 bits (98), Expect = 4e-13
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 43928 CCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATG 43987
||||||||||| ||||| ||||| ||||| ||| ||| || || |||| || || |||
Sbjct 3380784 CCAGAAGCACGTTGTTTCTATGGCTTTCAGATTCTCATTGAGAACGTTCACTCAGAGATG 3380843
Query 43988 TACAGTCTTCTGATAGATACGTACATCAAAGA 44019
||||| || |||||||| || |||||||||||
Sbjct 3380844 TACAGCCTGCTGATAGACACCTACATCAAAGA 3380875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397427599657315
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |