Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq965 86.0 7e-12
seq12 86.0 7e-12
seq771 82.4 8e-11
>seq965
Length=5818926
Score = 86.0 bits (94), Expect = 7e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
|||||||| || |||| ||| ||||||||||| |||||| ||| | ||||| || ||
Sbjct 305422 GTGAAAATATAGCGAGGGCTGGCAGCATCCTTCCCACCATGAAGCCTGGTACCAAACTGA 305481
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | || | | || || | ||||| || |||||||| |||||||||||||||
Sbjct 305482 CCAATAGGTTGTAGCAGATTAACATTGTTACTTCCAACAAAGTTCTGAGCCAAGTTGACA 305541
Query 117425 ATCGT 117429
|| ||
Sbjct 305542 ATAGT 305546
>seq12
Length=3827242
Score = 86.0 bits (94), Expect = 7e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| || | |||||| || || | || |||||||| || || | ||||||
Sbjct 3384537 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTTTTCTTC 3384478
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
| |||||| || ||| |||||||| |||||||||||||| || ||||||||
Sbjct 3384477 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 3384418
Query 74892 AC 74893
||
Sbjct 3384417 AC 3384416
>seq771
Length=1181103
Score = 82.4 bits (90), Expect = 8e-11
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086
|||| ||||||||||| | ||||| | || || ||||| ||||| || |||||||
Sbjct 589888 GCGTAAAGATGTATCGAGGACTGGCAGAGTCTTTCCCACCATGCAGCCTTGTGCCAAACT 589829
Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144
| ||| |||| || | ||||||||||||| |||||| || |||||||| || ||
Sbjct 589828 GACCAATAGGCTGTAGCAAGTTGAGGTTGTTGCTGCCCACAAAGTTCTGAGCTAAGTT 589771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547175895907400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |