Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq780 187 3e-42
seq515 158 1e-33
>seq780
Length=11850152
Score = 187 bits (206), Expect = 3e-42
Identities = 177/226 (78%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | || |||||||| || || |||||||| ||| | ||
Sbjct 4731638 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 4731579
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| ||||||| || || ||||||||||| || ||||| || ||||||
Sbjct 4731578 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 4731519
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||| ||||| || || |||| || ||||| ||||||| ||
Sbjct 4731518 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAAC 4731459
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTG 27631
|||| ||||||||||| || ||||| || ||||||| | ||||
Sbjct 4731458 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGTCTGAGAGGTG 4731413
Score = 185 bits (204), Expect = 1e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | || |||||||| || || |||||||| ||| | ||
Sbjct 4731182 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 4731123
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| ||||||| || || ||||||||||| || ||||| || ||||||
Sbjct 4731122 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 4731063
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||| ||||| || || |||| || ||||| ||||||| ||
Sbjct 4731062 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAAC 4731003
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || |||||||| || ||||| || ||||||| | |||||
Sbjct 4731002 ATCCAGAAAGAATCCACCCTCCATCTTGTGCTGCGTCTGAGAGGTGG 4730956
Score = 185 bits (204), Expect = 1e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || |||||||| ||| | ||
Sbjct 4731410 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 4731351
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| ||||||| || || ||||||||||| || ||||| || ||||||
Sbjct 4731350 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 4731291
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||| ||||| || || |||| || ||||| ||||||| ||
Sbjct 4731290 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAAC 4731231
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || ||||| || | || || | |||||
Sbjct 4731230 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGG 4731184
Score = 179 bits (198), Expect = 4e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || |||||||| ||| | ||
Sbjct 4730954 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 4730895
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| ||||||| || || ||||||||||| || ||||| || ||||||
Sbjct 4730894 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 4730835
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||| ||||| || || |||| || ||||| ||||||| ||
Sbjct 4730834 CAGCGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAAC 4730775
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || ||||| || | || || | |||||
Sbjct 4730774 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGG 4730728
>seq515
Length=1665176
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || | ||||||||| | ||
Sbjct 31545 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 31604
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||||| || || ||||||||||| || ||||| || || |||
Sbjct 31605 GACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAG 31664
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||||| ||||| || || |||| || || || | ||||| ||
Sbjct 31665 CAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAAC 31724
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || |||||||| |||| || | |||||
Sbjct 31725 ATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 31771
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || | ||||||||| | ||
Sbjct 30177 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 30236
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||||| || || ||||||||||| || ||||| | || |||
Sbjct 30237 GACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCAG 30296
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||||| ||||| || || |||| || || || | ||||| ||
Sbjct 30297 CAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAAC 30356
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || |||||||| |||| || | |||||
Sbjct 30357 ATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 30403
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || | ||||||||| | ||
Sbjct 30405 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 30464
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||||| || || ||||||||||| || ||||| | || |||
Sbjct 30465 GACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCAG 30524
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||||| ||||| || || |||| || || || | ||||| ||
Sbjct 30525 CAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAAC 30584
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || |||||||| |||| || | |||||
Sbjct 30585 ATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 30631
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || | ||||||||| | ||
Sbjct 30633 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 30692
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||||| || || ||||||||||| || ||||| | || |||
Sbjct 30693 GACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCAG 30752
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||||| ||||| || || |||| || || || | ||||| ||
Sbjct 30753 CAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAAC 30812
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || |||||||| |||| || | |||||
Sbjct 30813 ATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 30859
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || | ||||||||| | ||
Sbjct 30861 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 30920
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||||| || || ||||||||||| || ||||| | || |||
Sbjct 30921 GACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCAG 30980
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||||| ||||| || || |||| || || || | ||||| ||
Sbjct 30981 CAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAAC 31040
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || |||||||| |||| || | |||||
Sbjct 31041 ATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 31087
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || | ||||||||| | ||
Sbjct 31089 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 31148
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||||| || || ||||||||||| || ||||| | || |||
Sbjct 31149 GACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCAG 31208
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||||| ||||| || || |||| || || || | ||||| ||
Sbjct 31209 CAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAAC 31268
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || |||||||| |||| || | |||||
Sbjct 31269 ATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 31315
Score = 152 bits (168), Expect = 6e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || | ||||||||| | ||
Sbjct 31317 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 31376
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||||| || || ||||||||||| || ||||| | || |||
Sbjct 31377 GACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCAG 31436
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||||| ||||| || || |||| || || || | ||||| ||
Sbjct 31437 CAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAAC 31496
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || |||||||| |||| || | |||||
Sbjct 31497 ATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 31543
Score = 104 bits (114), Expect = 3e-17
Identities = 120/162 (74%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 27471 CATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCG 27530
||||| || | ||||| || || ||||||||||| || ||||| | || ||||| |
Sbjct 30014 CATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCTCTGATCAGCAAAG 30073
Query 27531 TCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCA 27590
|| || |||||||| ||||| || || |||| || || || | ||||| || ||||
Sbjct 30074 ACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAACATCCA 30133
Query 27591 AAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||||||| || |||||||| |||| || | |||||
Sbjct 30134 GAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 30175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570268603376560
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