Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq470 260 2e-64
seq532 105 9e-18
>seq470
Length=2661214
Score = 260 bits (288), Expect = 2e-64
Identities = 626/935 (67%), Gaps = 28/935 (3%)
Strand=Plus/Plus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
|| ||||||| ||| ||||| ||||| |||||||||||||| || || |||||| ||||
Sbjct 390488 CCGCTGAGCCAGGAGGAGGTGGAGTTCCCCATCGCCTACTCCATGGTCATCCACAACAAA 390547
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790
||||||||||||||||| |||||| || || |||| ||||| |||||| |||||||||||
Sbjct 390548 ATCGAGATGTTCGAGCGGCTCCTGCGGTCCCTCTATGCCCCCCAGAACATCTACTGCGTC 390607
Query 13791 CACGTGGACTCCAAG--TCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGT 13848
||| | ||| |||| |||||| || |||| || || |||||||| |
Sbjct 390608 CACATTGACAGCAAGTCTCCGGCCAC--TTTCAAGGAGGCTGTACAGGCCATCGTGGCCT 390665
Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTC 13908
||||||| || || |||| || ||| | | ||||| || | ||||||| |
Sbjct 390666 GCTTCCCCAATGTCTTTGTGGCTAGCCACCTGGAAAATGTGGTCTATGCCTCCTGGTCCC 390725
Query 13909 GCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTG--GACGCCTCCCCCGTCAAGTGGAG 13966
| |||| || ||||||| ||||||| ||||||| | | |||| | || ||| |
Sbjct 390726 GGCTGCAAGCTGACCTCAACTGCATGCAGGACCTGTTGCGGAGTCCCGTGCCA--TGGCG 390783
Query 13967 GTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCG 14026
||| | |||||| ||||| | |||||||| ||||||||||| |||||| | ||
Sbjct 390784 CTACGTCCTCAACACCTGCGGCACAGACTTCCCCATCAAGACCAACGCCGAGATCATCCG 390843
Query 14027 GGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCATGCCCAACCAC 14084
|| ||||||| ||| || |||| | ||||| || || | | | || || |
Sbjct 390844 TGCCCTGAAGGTGCTGCAGGGGCGGAACAGCATGGAGTCAGAGAAGCCCTCACC--CCTC 390901
Query 14085 AAGCTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCA-ACAC 14143
|||| ||| || | || || ||| | || || | | | ||| ||
Sbjct 390902 AAGCGGCAGCG---CTGGCAGTACCACCACG----AAGTGGGGACATTTATCTCACGGAC 390954
Query 14144 CGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTT 14203
| ||| | || |||||||||| || |||||| || | || || || ||| |
Sbjct 390955 TGCCAGAGAGAAACTGCCGCCGCCGCACAACTACCCCATGTTCACAGGCAATGCATACAT 391014
Query 14204 TGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGC---T 14260
|| ||| ||||||| |||||| | | || || || || || || | || |
Sbjct 391015 TGTGGTTACCCGGGCCTTCGTGCAGCACATCTTCGAGAAC---CCCACAGCTCAGCAGTT 391071
Query 14261 CATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAG 14320
| | | ||| | ||||||| |||||||| || ||||| | ||||||||| | | |
Sbjct 391072 CCTCGAGTGGGCCAAGGACACCTACAGCCCTGATGAGCATGTCTGGGCCACCCTCAACCG 391131
Query 14321 AATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTG 14380
||| ||| |||||| | || ||| || ||||||| | ||||||||||
Sbjct 391132 CATGCCCGGCGTGCCCGGCGCCATGCCCCAGAGCGACAAGTACCAGCTCTCGGACATGAA 391191
Query 14381 GGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCT 14440
||| | | | | ||||||||||| ||| ||||| || | || || || || |
Sbjct 391192 TGCCCTGCCCCGCCTGGTCAAGTGGCAGTACCTAGAGGGTGACACCAGCAAGGGTGCACC 391251
Query 14441 GTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGT 14500
|||||||| ||| |||| ||| | |||| |||| ||| |||| ||||||||
Sbjct 391252 CTACCCGCCCTGCACCGGCCAGCACCAGCGCGCCGTCTGTGTCTACGGGGTGGGCGACGT 391311
Query 14501 GAAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACG 14559
| ||| || | ||| | | ||||| || ||||||||||||||| | | |||||
Sbjct 391312 GTCCTGGGTGCTACAGCAGCAC-CACCTCTTGGCCAACAAGTTCGACCCCATGGTGGACG 391370
Query 14560 AGTTCGCCGTGCGCTGTCTGGACGAGGACGTGCGC 14594
| |||| | ||||| || ||| || |||||
Sbjct 391371 ATGCCGCCATCATGTGTCTCGAGGAGCACCTGCGC 391405
>seq532
Length=14234912
Score = 105 bits (116), Expect = 9e-18
Identities = 249/369 (67%), Gaps = 18/369 (5%)
Strand=Plus/Plus
Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAA---GATCGAGATGTTCGAGCGCCTC 13751
|| |||||||||||| || ||| | ||||| | | |||| |||||| | ||
Sbjct 6952296 TTCCCCATCGCCTACG---TCATGACCTTGCACAAAGAGTTTGAGACCTTCGAGAGGCTA 6952352
Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTC--CG 13809
| || || | ||| || || ||| |||||||| |||| |||||| ||||| | ||
Sbjct 6952353 TTCAGAGCGGTTTACATGCCCCAAAACATCTACTGCATCCATGTGGACGCCAAGGCACCG 6952412
Query 13810 GCGACGAGTTCATCCGG--GGCGTCTCGGCCATCGCC-AGGTGCTTCCCTAACGTGGCCC 13866
|| | | || || |||| |||| || || |||||||| |||| ||
Sbjct 6952413 GCCTC-----CTTCTGGCAGGCGGTGCGGCGCCTGCTGAGCTGCTTCCCCAACGCCTTCC 6952467
Query 13867 TGGCCCACCGG-CTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTC 13925
| ||| |||| | | || ||||| ||||| | ||| ||| ||| ||||||
Sbjct 6952468 TCGCCTCCCGGTCAGAGCGG-GTGGTCTACGGAGGCATCTCCCGCCTGCGGGCTGACCTC 6952526
Query 13926 AGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGC 13985
||||||| |||||| ||||| |||| ||| | |||||||||||| |||
Sbjct 6952527 CACTGCATGAGAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGCTCAACACCTGC 6952586
Query 13986 GGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGC 14045
|| ||||||||| | |||||||||| |||||| || ||| |||||||| ||| ||
Sbjct 6952587 GGCCAGGACTTCCCCTTGAAGACCAACCGGGAGATTGTCCGGTGGCTGAAGGGCCTCGGG 6952646
Query 14046 GGCAAGAAC 14054
|| ||||||
Sbjct 6952647 GGGAAGAAC 6952655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658690922650880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |