Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq470 260 2e-64 seq532 105 9e-18 >seq470 Length=2661214 Score = 260 bits (288), Expect = 2e-64 Identities = 626/935 (67%), Gaps = 28/935 (3%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || ||||||| ||| ||||| ||||| |||||||||||||| || || |||||| |||| Sbjct 390488 CCGCTGAGCCAGGAGGAGGTGGAGTTCCCCATCGCCTACTCCATGGTCATCCACAACAAA 390547 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 ||||||||||||||||| |||||| || || |||| ||||| |||||| ||||||||||| Sbjct 390548 ATCGAGATGTTCGAGCGGCTCCTGCGGTCCCTCTATGCCCCCCAGAACATCTACTGCGTC 390607 Query 13791 CACGTGGACTCCAAG--TCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGT 13848 ||| | ||| |||| |||||| || |||| || || |||||||| | Sbjct 390608 CACATTGACAGCAAGTCTCCGGCCAC--TTTCAAGGAGGCTGTACAGGCCATCGTGGCCT 390665 Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTC 13908 ||||||| || || |||| || ||| | | ||||| || | ||||||| | Sbjct 390666 GCTTCCCCAATGTCTTTGTGGCTAGCCACCTGGAAAATGTGGTCTATGCCTCCTGGTCCC 390725 Query 13909 GCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTG--GACGCCTCCCCCGTCAAGTGGAG 13966 | |||| || ||||||| ||||||| ||||||| | | |||| | || ||| | Sbjct 390726 GGCTGCAAGCTGACCTCAACTGCATGCAGGACCTGTTGCGGAGTCCCGTGCCA--TGGCG 390783 Query 13967 GTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCG 14026 ||| | |||||| ||||| | |||||||| ||||||||||| |||||| | || Sbjct 390784 CTACGTCCTCAACACCTGCGGCACAGACTTCCCCATCAAGACCAACGCCGAGATCATCCG 390843 Query 14027 GGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCATGCCCAACCAC 14084 || ||||||| ||| || |||| | ||||| || || | | | || || | Sbjct 390844 TGCCCTGAAGGTGCTGCAGGGGCGGAACAGCATGGAGTCAGAGAAGCCCTCACC--CCTC 390901 Query 14085 AAGCTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCA-ACAC 14143 |||| ||| || | || || ||| | || || | | | ||| || Sbjct 390902 AAGCGGCAGCG---CTGGCAGTACCACCACG----AAGTGGGGACATTTATCTCACGGAC 390954 Query 14144 CGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTT 14203 | ||| | || |||||||||| || |||||| || | || || || ||| | Sbjct 390955 TGCCAGAGAGAAACTGCCGCCGCCGCACAACTACCCCATGTTCACAGGCAATGCATACAT 391014 Query 14204 TGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGC---T 14260 || ||| ||||||| |||||| | | || || || || || || | || | Sbjct 391015 TGTGGTTACCCGGGCCTTCGTGCAGCACATCTTCGAGAAC---CCCACAGCTCAGCAGTT 391071 Query 14261 CATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAG 14320 | | | ||| | ||||||| |||||||| || ||||| | ||||||||| | | | Sbjct 391072 CCTCGAGTGGGCCAAGGACACCTACAGCCCTGATGAGCATGTCTGGGCCACCCTCAACCG 391131 Query 14321 AATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTG 14380 ||| ||| |||||| | || ||| || ||||||| | |||||||||| Sbjct 391132 CATGCCCGGCGTGCCCGGCGCCATGCCCCAGAGCGACAAGTACCAGCTCTCGGACATGAA 391191 Query 14381 GGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCT 14440 ||| | | | | ||||||||||| ||| ||||| || | || || || || | Sbjct 391192 TGCCCTGCCCCGCCTGGTCAAGTGGCAGTACCTAGAGGGTGACACCAGCAAGGGTGCACC 391251 Query 14441 GTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGT 14500 |||||||| ||| |||| ||| | |||| |||| ||| |||| |||||||| Sbjct 391252 CTACCCGCCCTGCACCGGCCAGCACCAGCGCGCCGTCTGTGTCTACGGGGTGGGCGACGT 391311 Query 14501 GAAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACG 14559 | ||| || | ||| | | ||||| || ||||||||||||||| | | ||||| Sbjct 391312 GTCCTGGGTGCTACAGCAGCAC-CACCTCTTGGCCAACAAGTTCGACCCCATGGTGGACG 391370 Query 14560 AGTTCGCCGTGCGCTGTCTGGACGAGGACGTGCGC 14594 | |||| | ||||| || ||| || ||||| Sbjct 391371 ATGCCGCCATCATGTGTCTCGAGGAGCACCTGCGC 391405 >seq532 Length=14234912 Score = 105 bits (116), Expect = 9e-18 Identities = 249/369 (67%), Gaps = 18/369 (5%) Strand=Plus/Plus Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAA---GATCGAGATGTTCGAGCGCCTC 13751 || |||||||||||| || ||| | ||||| | | |||| |||||| | || Sbjct 6952296 TTCCCCATCGCCTACG---TCATGACCTTGCACAAAGAGTTTGAGACCTTCGAGAGGCTA 6952352 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTC--CG 13809 | || || | ||| || || ||| |||||||| |||| |||||| ||||| | || Sbjct 6952353 TTCAGAGCGGTTTACATGCCCCAAAACATCTACTGCATCCATGTGGACGCCAAGGCACCG 6952412 Query 13810 GCGACGAGTTCATCCGG--GGCGTCTCGGCCATCGCC-AGGTGCTTCCCTAACGTGGCCC 13866 || | | || || |||| |||| || || |||||||| |||| || Sbjct 6952413 GCCTC-----CTTCTGGCAGGCGGTGCGGCGCCTGCTGAGCTGCTTCCCCAACGCCTTCC 6952467 Query 13867 TGGCCCACCGG-CTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTC 13925 | ||| |||| | | || ||||| ||||| | ||| ||| ||| |||||| Sbjct 6952468 TCGCCTCCCGGTCAGAGCGG-GTGGTCTACGGAGGCATCTCCCGCCTGCGGGCTGACCTC 6952526 Query 13926 AGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGC 13985 ||||||| |||||| ||||| |||| ||| | |||||||||||| ||| Sbjct 6952527 CACTGCATGAGAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGCTCAACACCTGC 6952586 Query 13986 GGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGC 14045 || ||||||||| | |||||||||| |||||| || ||| |||||||| ||| || Sbjct 6952587 GGCCAGGACTTCCCCTTGAAGACCAACCGGGAGATTGTCCGGTGGCTGAAGGGCCTCGGG 6952646 Query 14046 GGCAAGAAC 14054 || |||||| Sbjct 6952647 GGGAAGAAC 6952655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658690922650880