Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq977 109 4e-19 seq933 91.5 1e-13 >seq977 Length=740791 Score = 109 bits (120), Expect = 4e-19 Identities = 127/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||| || |||| |||||||| || ||||||||||||||||| || || ||||||| || Sbjct 265038 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAACCCATAAACTGGTCCCAAATC 265097 Query 30283 TCCCTCTTCCCT-GTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341 ||||| || || ||||| || || ||| |||| || || | || || || || | Sbjct 265098 CCCCTCCTCTCTGGTGCT-AAAACCTTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 265156 Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 |||| ||||| || || || ||||||||||||||| ||||| || || Sbjct 265157 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC 265205 >seq933 Length=2485477 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460 || |||||||||||||| || | || || |||||| | | ||| | |||||| || || Sbjct 1595227 TTGAGCTCCCTGCTGAGCACGATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 1595168 Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||||||||| || ||||||||||| ||||| | ||||| || ||| Sbjct 1595167 ATGGAGAACCAGGTTTTTCTACCCATGATCACTGCATTCTGTTTACCT 1595120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406281366963396