Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq933 91.5 1e-13 seq977 87.8 1e-12 >seq933 Length=2485477 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || |||||||||||||| || | || | |||||| | | ||| | |||||| || || Sbjct 1595227 TTGAGCTCCCTGCTGAGCACGATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 1595168 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||||||||| || ||||||||||| ||||| | ||||| |||||| Sbjct 1595167 ATGGAGAACCAGGTTTTTCTACCCATGATCACTGCATTCTGTTTACCT 1595120 >seq977 Length=740791 Score = 87.8 bits (96), Expect = 1e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT-GTGCTCGAA 30075 || ||||||||||||||||| || || ||||||| || ||||| || || ||||| || Sbjct 265060 AAGTGCCTCCACTGGAACCCATAAACTGGTCCCAAATCCCCCTCCTCTCTGGTGCT-AAA 265118 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 || ||| |||| || || | || || || || ||||| ||||| || || || | Sbjct 265119 ACCTTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTCACACCTTTTGC 265178 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCC 30162 ||||||||||||| ||||| || || Sbjct 265179 AGAGAGCTCTTTGGCATTTGTAGAACC 265205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406134177481618